#| ca.umontreal.iro.evolution.introns.WriteIntronTable Sun Sep 23 11:29:25 CEST 2007 #| System: Mac OS X 10.4.10 i386 #| Java: Java HotSpot(TM) Client VM 1.5.0_07-87 (1.5.0_07-164) mixed mode, "Apple Computer, Inc." #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/all-KOGs/Chromo/HTML/aligned #| Arguments: #| Input alignment: KOG0004.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Ptet gi|124400245|emb|CAK65731.1| -1 236 236 intron2 Ptet gi|124400245|emb|CAK65731.1| -1 425 425 intron3 Ptet gi|124400245|emb|CAK65731.1| -1 658 658 intron3 Ptet gi|124400245|emb|CAK65731.1| -1 697 697 intron3 Ptet gi|124400245|emb|CAK65731.1| -1 769 769 intron1 Ptet gi|124400245|emb|CAK65731.1| -1 811 811 intron1 Ptet gi|124400245|emb|CAK65731.1| -1 894 894 intron1 Ptet gi|124400245|emb|CAK65731.1| -1 985 985 intron3 Pram gnl|Phyra1_1|71343 -1 7 7 intron3 Pram gnl|Phyra1_1|71343 -1 43 43 intron1 Psoj gnl|Physo1_1|109100 -1 35 35 intron1 Pchr gnl|Phchr1|2618 -1 7 7 intron2 Pchr gnl|Phchr1|2618 -1 35 35 intron2 Pchr gnl|Phchr1|2618 -1 131 131 intron3 Ccin lcl|CC1G_00876 -1 7 7 intron2 Ccin lcl|CC1G_00876 -1 35 35 intron2 Ccin lcl|CC1G_00876 -1 86 86 intron3 Ccin lcl|CC1G_00876 -1 131 131 intron3 Hsap gi|4506713|ref|NP_002945.1| -1 16 16 intron3 Hsap gi|4506713|ref|NP_002945.1| -1 35 35 intron1 Hsap gi|4506713|ref|NP_002945.1| -1 63 63 intron3 Hsap gi|4506713|ref|NP_002945.1| -1 107 107 intron3 Amel gi|66531797|ref|XP_397323.2| -1 35 35 intron1 Amel gi|66531797|ref|XP_397323.2| -1 107 107 intron3 Tcas gi|91077776|ref|XP_969023.1| -1 107 107 intron3 Pbla gnl|Phybl1|74549 -1 35 35 intron1 Crei gnl|Chlre3|142065 -1 8 8 intron1 Crei gnl|Chlre3|142065 -1 33 33 intron1 Crei gnl|Chlre3|142065 -1 105 105 intron3 Pfal gi|23509248|ref|NP_701915.1| -1 35 35 intron1 Pfal gi|23509248|ref|NP_701915.1| -1 63 63 intron3 Pyoe gi|82915522|ref|XP_729109.1| -1 35 35 intron1 Pyoe gi|82915522|ref|XP_729109.1| -1 63 63 intron3 Pber gi|68076543|ref|XP_680191.1| -1 32 32 intron3