#| ca.umontreal.iro.evolution.introns.WriteIntronTable Sun Sep 23 11:29:26 CEST 2007 #| System: Mac OS X 10.4.10 i386 #| Java: Java HotSpot(TM) Client VM 1.5.0_07-87 (1.5.0_07-164) mixed mode, "Apple Computer, Inc." #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/all-KOGs/Chromo/HTML/aligned #| Arguments: #| Input alignment: KOG0012.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Crei gnl|Chlre3|142910 -1 17 17 intron3 Crei gnl|Chlre3|142910 -1 54 54 intron2 Crei gnl|Chlre3|142910 -1 132 132 intron3 Crei gnl|Chlre3|142910 -1 161 161 intron2 Crei gnl|Chlre3|142910 -1 187 187 intron3 Crei gnl|Chlre3|142910 -1 212 212 intron3 Crei gnl|Chlre3|142910 -1 240 240 intron3 Tthe gi|118368668|ref|XP_001017540.1| -1 33 33 intron3 Tthe gi|118368668|ref|XP_001017540.1| -1 65 65 intron2 Tthe gi|118368668|ref|XP_001017540.1| -1 156 156 intron3 Tthe gi|118368668|ref|XP_001017540.1| -1 171 171 intron3 Tthe gi|118368668|ref|XP_001017540.1| -1 200 200 intron2 Tthe gi|118368668|ref|XP_001017540.1| -1 250 250 intron2 Tthe gi|118368668|ref|XP_001017540.1| -1 293 293 intron3 Ptet gi|124401024|emb|CAK66506.1| -1 36 36 intron3 Ptet gi|124401024|emb|CAK66506.1| -1 130 130 intron3 Ptet gi|124401024|emb|CAK66506.1| -1 259 259 intron3 Ptet gi|124401024|emb|CAK66506.1| -1 286 286 intron3 Pram gnl|Phyra1_1|72899 -1 34 34 intron3 Pram gnl|Phyra1_1|72899 -1 56 56 intron3 Pram gnl|Phyra1_1|72899 -1 103 103 intron3 Pram gnl|Phyra1_1|72899 -1 124 124 intron3 Pram gnl|Phyra1_1|72899 -1 142 142 intron3 Pram gnl|Phyra1_1|72899 -1 238 238 intron3 Pram gnl|Phyra1_1|72899 -1 257 257 intron3 Pram gnl|Phyra1_1|72899 -1 307 307 intron3 Pram gnl|Phyra1_1|72899 -1 334 334 intron3 Pram gnl|Phyra1_1|72899 -1 397 397 intron3 Pram gnl|Phyra1_1|72899 -1 420 420 intron2 Pram gnl|Phyra1_1|72899 -1 466 466 intron1 Pram gnl|Phyra1_1|72899 -1 519 519 intron1 Psoj gnl|Physo1_1|141000 -1 34 34 intron3 Psoj gnl|Physo1_1|141000 -1 56 56 intron3 Psoj gnl|Physo1_1|141000 -1 103 103 intron3 Psoj gnl|Physo1_1|141000 -1 124 124 intron3 Psoj gnl|Physo1_1|141000 -1 142 142 intron3 Psoj gnl|Physo1_1|141000 -1 247 247 intron3 Psoj gnl|Physo1_1|141000 -1 297 297 intron3 Psoj gnl|Physo1_1|141000 -1 324 324 intron3 Psoj gnl|Physo1_1|141000 -1 402 402 intron3 Psoj gnl|Physo1_1|141000 -1 419 419 intron1 Psoj gnl|Physo1_1|141000 -1 461 461 intron1 Psoj gnl|Physo1_1|141000 -1 514 514 intron1 Osat gi|115444859|ref|NP_001046209.1| -1 22 22 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 33 33 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 77 77 intron2 Osat gi|115444859|ref|NP_001046209.1| -1 113 113 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 152 152 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 174 174 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 195 195 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 210 210 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 231 231 intron2 Osat gi|115444859|ref|NP_001046209.1| -1 262 262 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 293 293 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 317 317 intron1 Osat gi|115444859|ref|NP_001046209.1| -1 342 342 intron3 Osat gi|115444859|ref|NP_001046209.1| -1 362 362 intron1 Osat gi|115444859|ref|NP_001046209.1| -1 372 372 intron3 Atha gi|18399933|ref|NP_566451.1| -1 22 22 intron3 Atha gi|18399933|ref|NP_566451.1| -1 33 33 intron3 Atha gi|18399933|ref|NP_566451.1| -1 77 77 intron2 Atha gi|18399933|ref|NP_566451.1| -1 117 117 intron3 Atha gi|18399933|ref|NP_566451.1| -1 156 156 intron3 Atha gi|18399933|ref|NP_566451.1| -1 178 178 intron3 Atha gi|18399933|ref|NP_566451.1| -1 199 199 intron3 Atha gi|18399933|ref|NP_566451.1| -1 214 214 intron3 Atha gi|18399933|ref|NP_566451.1| -1 235 235 intron2 Atha gi|18399933|ref|NP_566451.1| -1 266 266 intron3 Atha gi|18399933|ref|NP_566451.1| -1 297 297 intron3 Atha gi|18399933|ref|NP_566451.1| -1 321 321 intron1 Atha gi|18399933|ref|NP_566451.1| -1 344 344 intron3 Atha gi|18399933|ref|NP_566451.1| -1 372 372 intron3 Ptri gnl|Poptr1_1|550640 -1 22 22 intron3 Ptri gnl|Poptr1_1|550640 -1 33 33 intron3 Ptri gnl|Poptr1_1|550640 -1 77 77 intron2 Ptri gnl|Poptr1_1|550640 -1 113 113 intron3 Ptri gnl|Poptr1_1|550640 -1 152 152 intron3 Ptri gnl|Poptr1_1|550640 -1 174 174 intron3 Ptri gnl|Poptr1_1|550640 -1 195 195 intron3 Ptri gnl|Poptr1_1|550640 -1 210 210 intron3 Ptri gnl|Poptr1_1|550640 -1 231 231 intron2 Ptri gnl|Poptr1_1|550640 -1 262 262 intron3 Ptri gnl|Poptr1_1|550640 -1 293 293 intron3 Ptri gnl|Poptr1_1|550640 -1 317 317 intron1 Ptri gnl|Poptr1_1|550640 -1 340 340 intron3 Ptri gnl|Poptr1_1|550640 -1 360 360 intron1 Ptri gnl|Poptr1_1|550640 -1 368 368 intron3 Hsap gi|62955833|ref|NP_115717.3| -1 46 46 intron3 Hsap gi|62955833|ref|NP_115717.3| -1 90 90 intron1 Hsap gi|62955833|ref|NP_115717.3| -1 169 169 intron1 Hsap gi|62955833|ref|NP_115717.3| -1 211 211 intron2 Hsap gi|62955833|ref|NP_115717.3| -1 254 254 intron1 Hsap gi|62955833|ref|NP_115717.3| -1 297 297 intron1 Hsap gi|62955833|ref|NP_115717.3| -1 331 331 intron3 Hsap gi|62955833|ref|NP_115717.3| -1 395 395 intron1 Amel gi|110759016|ref|XP_624431.2| -1 88 88 intron1 Amel gi|110759016|ref|XP_624431.2| -1 161 161 intron1 Amel gi|110759016|ref|XP_624431.2| -1 246 246 intron1 Amel gi|110759016|ref|XP_624431.2| -1 348 348 intron1 Amel gi|110759016|ref|XP_624431.2| -1 395 395 intron1 Tcas gi|91082405|ref|XP_969775.1| -1 88 88 intron1 Tcas gi|91082405|ref|XP_969775.1| -1 151 151 intron1 Tcas gi|91082405|ref|XP_969775.1| -1 236 236 intron1 Tcas gi|91082405|ref|XP_969775.1| -1 313 313 intron3 Tcas gi|91082405|ref|XP_969775.1| -1 378 378 intron1 Rory lcl|RO3G_12644 -1 13 13 intron3 Rory lcl|RO3G_12644 -1 59 59 intron2 Rory lcl|RO3G_12644 -1 83 83 intron3 Rory lcl|RO3G_12644 -1 190 190 intron1 Pchr gnl|Phchr1|1084 -1 33 33 intron3 Pchr gnl|Phchr1|1084 -1 63 63 intron3 Pchr gnl|Phchr1|1084 -1 144 144 intron2 Pchr gnl|Phchr1|1084 -1 167 167 intron1 Pchr gnl|Phchr1|1084 -1 174 174 intron2 Pchr gnl|Phchr1|1084 -1 219 219 intron3 Ccin lcl|CC1G_08140 -1 33 33 intron3 Ccin lcl|CC1G_08140 -1 81 81 intron2 Ccin lcl|CC1G_08140 -1 106 106 intron3 Ccin lcl|CC1G_08140 -1 189 189 intron2 Ccin lcl|CC1G_08140 -1 212 212 intron1 Ccin lcl|CC1G_08140 -1 221 221 intron2 Ccin lcl|CC1G_08140 -1 266 266 intron3 Tpar gi|71030112|ref|XP_764698.1| -1 88 88 intron1 Tpar gi|71030112|ref|XP_764698.1| -1 144 144 intron3 Tpar gi|71030112|ref|XP_764698.1| -1 194 194 intron1 Tpar gi|71030112|ref|XP_764698.1| -1 219 219 intron3 Tpar gi|71030112|ref|XP_764698.1| -1 246 246 intron2 Tpar gi|71030112|ref|XP_764698.1| -1 310 310 intron3 Tann gi|84995720|ref|XP_952582.1| -1 10 10 intron1 Tann gi|84995720|ref|XP_952582.1| -1 93 93 intron1 Tann gi|84995720|ref|XP_952582.1| -1 149 149 intron3 Tann gi|84995720|ref|XP_952582.1| -1 199 199 intron1 Tann gi|84995720|ref|XP_952582.1| -1 224 224 intron3 Tann gi|84995720|ref|XP_952582.1| -1 251 251 intron2 Tann gi|84995720|ref|XP_952582.1| -1 373 373 intron2