#| ca.umontreal.iro.evolution.introns.WriteIntronTable Sun Sep 23 11:29:26 CEST 2007 #| System: Mac OS X 10.4.10 i386 #| Java: Java HotSpot(TM) Client VM 1.5.0_07-87 (1.5.0_07-164) mixed mode, "Apple Computer, Inc." #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/all-KOGs/Chromo/HTML/aligned #| Arguments: #| Input alignment: KOG0073.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Pfal gi|23509621|ref|NP_702288.1| -1 140 140 intron3 Pyoe gi|82753108|ref|XP_727543.1| -1 140 140 intron3 Tpar gi|71026983|ref|XP_763135.1| -1 22 22 intron2 Tpar gi|71026983|ref|XP_763135.1| -1 59 59 intron2 Tpar gi|71026983|ref|XP_763135.1| -1 113 113 intron3 Tann gi|85000205|ref|XP_954821.1| -1 22 22 intron2 Tann gi|85000205|ref|XP_954821.1| -1 59 59 intron2 Tann gi|85000205|ref|XP_954821.1| -1 113 113 intron3 Tann gi|85000205|ref|XP_954821.1| -1 140 140 intron3 Ccin lcl|CC1G_11389 -1 6 6 intron2 Ccin lcl|CC1G_11389 -1 43 43 intron2 Osat gi|115445861|ref|NP_001046710.1| -1 22 22 intron2 Osat gi|115445861|ref|NP_001046710.1| -1 59 59 intron2 Osat gi|115445861|ref|NP_001046710.1| -1 113 113 intron3 Osat gi|115445861|ref|NP_001046710.1| -1 140 140 intron3 Ptri gnl|Poptr1_1|832385 -1 22 22 intron2 Ptri gnl|Poptr1_1|832385 -1 59 59 intron2 Ptri gnl|Poptr1_1|832385 -1 113 113 intron3 Ptri gnl|Poptr1_1|832385 -1 140 140 intron3 Atha gi|15224165|ref|NP_179430.1| -1 22 22 intron2 Atha gi|15224165|ref|NP_179430.1| -1 59 59 intron2 Atha gi|15224165|ref|NP_179430.1| -1 113 113 intron3 Atha gi|15224165|ref|NP_179430.1| -1 140 140 intron3 Pram gnl|Phyra1_1|71974 -1 22 22 intron2 Pram gnl|Phyra1_1|71974 -1 59 59 intron2 Pram gnl|Phyra1_1|71974 -1 83 83 intron3 Pram gnl|Phyra1_1|71974 -1 113 113 intron3 Psoj gnl|Physo1_1|108171 -1 22 22 intron2 Psoj gnl|Physo1_1|108171 -1 59 59 intron2 Psoj gnl|Physo1_1|108171 -1 83 83 intron3 Psoj gnl|Physo1_1|108171 -1 113 113 intron3 Pchr gnl|Phchr1|139806 -1 14 14 intron3 Pchr gnl|Phchr1|139806 -1 22 22 intron2 Pchr gnl|Phchr1|139806 -1 59 59 intron2 Pchr gnl|Phchr1|139806 -1 65 65 intron1 Pchr gnl|Phchr1|139806 -1 113 113 intron3 Pchr gnl|Phchr1|139806 -1 140 140 intron3 Pchr gnl|Phchr1|139806 -1 178 178 intron3 Ftri gnl|Phatr2|51819 -1 9 9 intron3 Ptet gi|124393759|emb|CAK59285.1| -1 66 66 intron1 Otau gi|116057640|emb|CAL53843.1| -1 9 9 intron3 Crei gnl|Chlre3|154000 -1 59 59 intron2 Pbla gnl|Phybl1|35933 -1 22 22 intron2 Pbla gnl|Phybl1|35933 -1 59 59 intron2 Pbla gnl|Phybl1|35933 -1 113 113 intron3 Pbla gnl|Phybl1|35933 -1 140 140 intron3 Amel gi|48095928|ref|XP_394559.1| -1 22 22 intron2 Tcas gi|91087357|ref|XP_975625.1| -1 22 22 intron2 Tcas gi|91087357|ref|XP_975625.1| -1 59 59 intron2 Tcas gi|91087357|ref|XP_975625.1| -1 113 113 intron3 Hsap gi|4502229|ref|NP_001658.1| -1 22 22 intron2 Hsap gi|4502229|ref|NP_001658.1| -1 59 59 intron2 Hsap gi|4502229|ref|NP_001658.1| -1 113 113 intron3 Hsap gi|4502229|ref|NP_001658.1| -1 140 140 intron3