#| ca.umontreal.iro.evolution.introns.WriteIntronTable Tue Apr 12 01:40:48 EDT 2011 #| System: Mac OS X 10.6.7 x86_64 #| Java: Java HotSpot(TM) 64-Bit Server VM 19.1-b02-334 (1.6.0_24-b07-334-10M3326) mixed mode, Apple Inc. #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/census2010/pipeline/3MCMC/HTML #| Arguments: #| Input alignment: alignments/KOG0424.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Cele gi|17553684|ref|NP_498198.1| -1 49 49 intron3 Cele gi|17553684|ref|NP_498198.1| -1 89 89 intron3 Cele gi|17553684|ref|NP_498198.1| -1 119 119 intron1 Cele gi|17553684|ref|NP_498198.1| -1 169 169 intron2 Ehux gnl|Emihu1|66742 -1 40 40 intron2 Ehux gnl|Emihu1|66742 -1 88 88 intron3 C64A gnl|ChlNC64A_1|144242 -1 19 19 intron3 C64A gnl|ChlNC64A_1|144242 -1 68 68 intron1 C64A gnl|ChlNC64A_1|144242 -1 93 93 intron1 C64A gnl|ChlNC64A_1|144242 -1 118 118 intron3 C64A gnl|ChlNC64A_1|144242 -1 127 127 intron1 C64A gnl|ChlNC64A_1|144242 -1 146 146 intron2 Ptet gi|145542247|ref|XP_001456811.1| -1 53 53 intron3 Ptet gi|145542247|ref|XP_001456811.1| -1 383 383 intron2 Ptet gi|145542247|ref|XP_001456811.1| -1 418 418 intron2 Ptet gi|145542247|ref|XP_001456811.1| -1 508 508 intron3 Ptet gi|145542247|ref|XP_001456811.1| -1 597 597 intron2 Tthe gi|118362446|ref|XP_001014450.1| -1 37 37 intron3 Tthe gi|118362446|ref|XP_001014450.1| -1 64 64 intron3 Tthe gi|118362446|ref|XP_001014450.1| -1 92 92 intron3 Tthe gi|118362446|ref|XP_001014450.1| -1 117 117 intron1 Tthe gi|118362446|ref|XP_001014450.1| -1 132 132 intron1 Tthe gi|118362446|ref|XP_001014450.1| -1 181 181 intron2 Mbre gi|167519054|ref|XP_001743867.1| -1 22 22 intron3 Mbre gi|167519054|ref|XP_001743867.1| -1 44 44 intron1 Mbre gi|167519054|ref|XP_001743867.1| -1 50 50 intron3 Mbre gi|167519054|ref|XP_001743867.1| -1 75 75 intron1 Mbre gi|167519054|ref|XP_001743867.1| -1 111 111 intron3 Mbre gi|167519054|ref|XP_001743867.1| -1 138 138 intron2 Pfal gi|124506851|ref|XP_001352023.1| -1 49 49 intron3 Pfal gi|124506851|ref|XP_001352023.1| -1 90 90 intron1 Pfal gi|124506851|ref|XP_001352023.1| -1 117 117 intron3 Pviv gi|156097308|ref|XP_001614687.1| -1 49 49 intron3 Pviv gi|156097308|ref|XP_001614687.1| -1 90 90 intron1 Pviv gi|156097308|ref|XP_001614687.1| -1 117 117 intron3 Tgon gi|237840701|ref|XP_002369648.1| -1 108 108 intron3 Tgon gi|237840701|ref|XP_002369648.1| -1 176 176 intron3 Bbov gi|156083342|ref|XP_001609155.1| -1 50 50 intron3 Bbov gi|156083342|ref|XP_001609155.1| -1 118 118 intron3 Tann gi|85001035|ref|XP_955236.1| -1 50 50 intron3 Tann gi|85001035|ref|XP_955236.1| -1 118 118 intron3 Tpar gi|71027849|ref|XP_763568.1| -1 50 50 intron3 Tpar gi|71027849|ref|XP_763568.1| -1 118 118 intron3 Scer gi|6320139|ref|NP_010219.1| -1 13 13 intron2 Dpur gnl|Dicpu1|58449 -1 22 22 intron3 Dpur gnl|Dicpu1|58449 -1 50 50 intron3 Dpur gnl|Dicpu1|58449 -1 138 138 intron2 Ddis gi|66806655|ref|XP_637050.1| -1 50 50 intron3 Ddis gi|66806655|ref|XP_637050.1| -1 111 111 intron3 Ddis gi|66806655|ref|XP_637050.1| -1 138 138 intron2 Spun gnl|Spun1|SPPG_07072T0 -1 33 33 intron1 Psoj gnl|Physo1_1|108868 -1 7 7 intron3 Bden lcl|BDEG_08124 -1 9 9 intron1 Bden lcl|BDEG_08124 -1 38 38 intron2 Ftri gi|219119898|ref|XP_002180700.1| -1 76 76 intron1 Aano gnl|Auran1|31459 -1 13 13 intron2 Aano gnl|Auran1|31459 -1 66 66 intron3 Tpse gi|223998414|ref|XP_002288880.1| -1 13 13 intron3 Fcyl gnl|Fracy1|269014 -1 76 76 intron1 Mlar gnl|Mellp1|114055 -1 6 6 intron2 Mlar gnl|Mellp1|114055 -1 22 22 intron3 Mlar gnl|Mellp1|114055 -1 50 50 intron3 Mlar gnl|Mellp1|114055 -1 67 67 intron1 Mlar gnl|Mellp1|114055 -1 75 75 intron1 Mlar gnl|Mellp1|114055 -1 111 111 intron3 Mlar gnl|Mellp1|114055 -1 145 145 intron2 Amac gnl|Amac3|AMAG_14727T0 -1 19 19 intron1 Amac gnl|Amac3|AMAG_14727T0 -1 23 23 intron1 Amac gnl|Amac3|AMAG_14727T0 -1 51 51 intron3 Amac gnl|Amac3|AMAG_14727T0 -1 74 74 intron1 Amac gnl|Amac3|AMAG_14727T0 -1 118 118 intron1 Cneo gi|58271112|ref|XP_572712.1| -1 1 1 intron3 Cneo gi|58271112|ref|XP_572712.1| -1 22 22 intron3 Cneo gi|58271112|ref|XP_572712.1| -1 50 50 intron3 Cneo gi|58271112|ref|XP_572712.1| -1 67 67 intron1 Cneo gi|58271112|ref|XP_572712.1| -1 75 75 intron1 Cneo gi|58271112|ref|XP_572712.1| -1 138 138 intron2 Anid gi|67528402|ref|XP_662003.1| -1 8 8 intron1 Anid gi|67528402|ref|XP_662003.1| -1 74 74 intron1 Anid gi|67528402|ref|XP_662003.1| -1 82 82 intron1 Mgra gnl|Mycgr3|77491 -1 12 12 intron2 Mgra gnl|Mycgr3|77491 -1 66 66 intron1 Bfuc gi|154316508|ref|XP_001557575.1| -1 12 12 intron2 Bfuc gi|154316508|ref|XP_001557575.1| -1 67 67 intron1 Bfuc gi|154316508|ref|XP_001557575.1| -1 75 75 intron1 Sscl gi|156043289|ref|XP_001588201.1| -1 12 12 intron2 Sscl gi|156043289|ref|XP_001588201.1| -1 67 67 intron1 Sscl gi|156043289|ref|XP_001588201.1| -1 75 75 intron1 Pnod gi|169604236|ref|XP_001795539.1| -1 14 14 intron2 Pnod gi|169604236|ref|XP_001795539.1| -1 76 76 intron1 Chet gnl|CocheC5_1|25638 -1 12 12 intron2 Chet gnl|CocheC5_1|25638 -1 74 74 intron1 Prep gi|189195648|ref|XP_001934162.1| -1 12 12 intron2 Prep gi|189195648|ref|XP_001934162.1| -1 74 74 intron1 Cimm gi|119188145|ref|XP_001244679.1| -1 13 13 intron2 Cimm gi|119188145|ref|XP_001244679.1| -1 67 67 intron1 Cimm gi|119188145|ref|XP_001244679.1| -1 75 75 intron1 Uree gi|258568254|ref|XP_002584871.1| -1 13 13 intron2 Uree gi|258568254|ref|XP_002584871.1| -1 67 67 intron1 Uree gi|258568254|ref|XP_002584871.1| -1 75 75 intron1 Uree gi|258568254|ref|XP_002584871.1| -1 157 157 intron1 Gzea gi|46136839|ref|XP_390111.1| -1 12 12 intron2 Gzea gi|46136839|ref|XP_390111.1| -1 67 67 intron1 Gzea gi|46136839|ref|XP_390111.1| -1 75 75 intron1 Mgri gi|145610685|ref|XP_368274.2| -1 12 12 intron2 Mgri gi|145610685|ref|XP_368274.2| -1 66 66 intron1 Mgri gi|145610685|ref|XP_368274.2| -1 74 74 intron1 Ncra gi|85101100|ref|XP_961092.1| -1 12 12 intron2 Ncra gi|85101100|ref|XP_961092.1| -1 66 66 intron1 Ncra gi|85101100|ref|XP_961092.1| -1 74 74 intron1 Sros gnl|Sporo1|31648 -1 22 22 intron3 Sros gnl|Sporo1|31648 -1 50 50 intron3 Sros gnl|Sporo1|31648 -1 67 67 intron1 Sros gnl|Sporo1|31648 -1 75 75 intron1 Sros gnl|Sporo1|31648 -1 111 111 intron3 Sros gnl|Sporo1|31648 -1 138 138 intron2 Sros gnl|Sporo1|31648 -1 145 145 intron2 Sjap gi|213405058|ref|XP_002173301.1| -1 22 22 intron3 Sjap gi|213405058|ref|XP_002173301.1| -1 67 67 intron1 Sjap gi|213405058|ref|XP_002173301.1| -1 75 75 intron1 Sjap gi|213405058|ref|XP_002173301.1| -1 138 138 intron2 Spom gi|19114116|ref|NP_593204.1| -1 22 22 intron3 Spom gi|19114116|ref|NP_593204.1| -1 67 67 intron1 Spom gi|19114116|ref|NP_593204.1| -1 75 75 intron1 Spom gi|19114116|ref|NP_593204.1| -1 111 111 intron3 Spom gi|19114116|ref|NP_593204.1| -1 138 138 intron2 Umay gi|71020917|ref|XP_760689.1| -1 22 22 intron3 Umay gi|71020917|ref|XP_760689.1| -1 50 50 intron3 Fchr gnl|Phchr1|149 -1 24 24 intron3 Fchr gnl|Phchr1|149 -1 52 52 intron3 Fchr gnl|Phchr1|149 -1 69 69 intron1 Fchr gnl|Phchr1|149 -1 77 77 intron1 Fchr gnl|Phchr1|149 -1 113 113 intron3 Fchr gnl|Phchr1|149 -1 140 140 intron2 Fchr gnl|Phchr1|149 -1 147 147 intron2 Ccin gi|169852984|ref|XP_001833174.1| -1 22 22 intron3 Ccin gi|169852984|ref|XP_001833174.1| -1 50 50 intron3 Ccin gi|169852984|ref|XP_001833174.1| -1 67 67 intron1 Ccin gi|169852984|ref|XP_001833174.1| -1 75 75 intron1 Ccin gi|169852984|ref|XP_001833174.1| -1 155 155 intron2 Ccin gi|169852984|ref|XP_001833174.1| -1 162 162 intron2 Abis gnl|Agabi_varbisH97_2|190282 -1 22 22 intron3 Abis gnl|Agabi_varbisH97_2|190282 -1 50 50 intron3 Abis gnl|Agabi_varbisH97_2|190282 -1 67 67 intron1 Abis gnl|Agabi_varbisH97_2|190282 -1 75 75 intron1 Abis gnl|Agabi_varbisH97_2|190282 -1 111 111 intron3 Abis gnl|Agabi_varbisH97_2|190282 -1 138 138 intron2 Abis gnl|Agabi_varbisH97_2|190282 -1 145 145 intron2 Lbic gnl|Lacbi1|187883 -1 22 22 intron3 Lbic gnl|Lacbi1|187883 -1 50 50 intron3 Lbic gnl|Lacbi1|187883 -1 67 67 intron1 Lbic gnl|Lacbi1|187883 -1 75 75 intron1 Lbic gnl|Lacbi1|187883 -1 111 111 intron3 Lbic gnl|Lacbi1|187883 -1 138 138 intron2 Lbic gnl|Lacbi1|187883 -1 145 145 intron2 Cowc lcl|CAOG_04633T0 -1 21 21 intron3 Cowc lcl|CAOG_04633T0 -1 43 43 intron1 Cowc lcl|CAOG_04633T0 -1 49 49 intron3 Cowc lcl|CAOG_04633T0 -1 74 74 intron1 Cowc lcl|CAOG_04633T0 -1 110 110 intron3 Cowc lcl|CAOG_04633T0 -1 137 137 intron2 Prsp lcl|PTSG_10373T0 -1 22 22 intron3 Prsp lcl|PTSG_10373T0 -1 44 44 intron1 Prsp lcl|PTSG_10373T0 -1 75 75 intron1 Prsp lcl|PTSG_10373T0 -1 111 111 intron3 Sman gi|256090388|ref|XP_002581175.1| -1 28 28 intron3 Sman gi|256090388|ref|XP_002581175.1| -1 56 56 intron3 Sman gi|256090388|ref|XP_002581175.1| -1 117 117 intron3 Apis gi|193638929|ref|XP_001947239.1| -1 22 22 intron3 Apis gi|193638929|ref|XP_001947239.1| -1 50 50 intron3 Apis gi|193638929|ref|XP_001947239.1| -1 90 90 intron1 Apis gi|193638929|ref|XP_001947239.1| -1 138 138 intron2 Bflo gi|260817497|ref|XP_002603623.1| -1 22 22 intron3 Bflo gi|260817497|ref|XP_002603623.1| -1 50 50 intron3 Bflo gi|260817497|ref|XP_002603623.1| -1 75 75 intron1 Bflo gi|260817497|ref|XP_002603623.1| -1 111 111 intron3 Bflo gi|260817497|ref|XP_002603623.1| -1 138 138 intron2 Spur gi|72086053|ref|XP_793891.1| -1 22 22 intron3 Spur gi|72086053|ref|XP_793891.1| -1 44 44 intron1 Spur gi|72086053|ref|XP_793891.1| -1 50 50 intron3 Spur gi|72086053|ref|XP_793891.1| -1 75 75 intron1 Spur gi|72086053|ref|XP_793891.1| -1 111 111 intron3 Spur gi|72086053|ref|XP_793891.1| -1 138 138 intron2 Lgig gnl|Lotgi1|110263 -1 22 22 intron3 Lgig gnl|Lotgi1|110263 -1 50 50 intron3 Lgig gnl|Lotgi1|110263 -1 75 75 intron1 Lgig gnl|Lotgi1|110263 -1 111 111 intron3 Lgig gnl|Lotgi1|110263 -1 138 138 intron2 CspI gnl|Capca1|21101 -1 22 22 intron3 CspI gnl|Capca1|21101 -1 50 50 intron3 CspI gnl|Capca1|21101 -1 75 75 intron1 CspI gnl|Capca1|21101 -1 111 111 intron3 CspI gnl|Capca1|21101 -1 138 138 intron2 Hrob gnl|Helro1|71397 -1 23 23 intron3 Hrob gnl|Helro1|71397 -1 51 51 intron3 Hrob gnl|Helro1|71397 -1 76 76 intron1 Hrob gnl|Helro1|71397 -1 112 112 intron3 Hrob gnl|Helro1|71397 -1 139 139 intron2 Drer gi|18859521|ref|NP_571908.1| -1 22 22 intron3 Drer gi|18859521|ref|NP_571908.1| -1 50 50 intron3 Drer gi|18859521|ref|NP_571908.1| -1 75 75 intron1 Drer gi|18859521|ref|NP_571908.1| -1 111 111 intron3 Drer gi|18859521|ref|NP_571908.1| -1 138 138 intron2 Hsap gi|4507785|ref|NP_003336.1| -1 22 22 intron3 Hsap gi|4507785|ref|NP_003336.1| -1 50 50 intron3 Hsap gi|4507785|ref|NP_003336.1| -1 75 75 intron1 Hsap gi|4507785|ref|NP_003336.1| -1 111 111 intron3 Hsap gi|4507785|ref|NP_003336.1| -1 138 138 intron2 Ggal gi|45383606|ref|NP_989596.1| -1 22 22 intron3 Ggal gi|45383606|ref|NP_989596.1| -1 50 50 intron3 Ggal gi|45383606|ref|NP_989596.1| -1 75 75 intron1 Ggal gi|45383606|ref|NP_989596.1| -1 111 111 intron3 Ggal gi|45383606|ref|NP_989596.1| -1 138 138 intron2 Tgut gi|224070652|ref|XP_002198259.1| -1 22 22 intron3 Tgut gi|224070652|ref|XP_002198259.1| -1 50 50 intron3 Tgut gi|224070652|ref|XP_002198259.1| -1 75 75 intron1 Tgut gi|224070652|ref|XP_002198259.1| -1 111 111 intron3 Tgut gi|224070652|ref|XP_002198259.1| -1 138 138 intron2 Aaeg gi|157116152|ref|XP_001658383.1| -1 11 11 intron3 Aaeg gi|157116152|ref|XP_001658383.1| -1 39 39 intron3 Aaeg gi|157116152|ref|XP_001658383.1| -1 127 127 intron2 Isca gi|241834470|ref|XP_002414996.1| -1 8 8 intron2 Isca gi|241834470|ref|XP_002414996.1| -1 14 14 intron3 Isca gi|241834470|ref|XP_002414996.1| -1 37 37 intron3 Isca gi|241834470|ref|XP_002414996.1| -1 65 65 intron3 Isca gi|241834470|ref|XP_002414996.1| -1 90 90 intron1 Isca gi|241834470|ref|XP_002414996.1| -1 126 126 intron3 Isca gi|241834470|ref|XP_002414996.1| -1 153 153 intron2 Dpul gnl|Dappu1|230818 -1 22 22 intron3 Dpul gnl|Dappu1|230818 -1 50 50 intron3 Dpul gnl|Dappu1|230818 -1 90 90 intron1 Dpul gnl|Dappu1|230818 -1 138 138 intron2 Tcas gi|91088069|ref|XP_967918.1| -1 22 22 intron3 Tcas gi|91088069|ref|XP_967918.1| -1 50 50 intron3 Tcas gi|91088069|ref|XP_967918.1| -1 138 138 intron2 Bmor gnl|Bmor|BGIBMGA005425-PA -1 22 22 intron3 Bmor gnl|Bmor|BGIBMGA005425-PA -1 50 50 intron3 Bmor gnl|Bmor|BGIBMGA005425-PA -1 138 138 intron2 Amel gi|66519638|ref|XP_623641.1| -1 22 22 intron3 Amel gi|66519638|ref|XP_623641.1| -1 50 50 intron3 Amel gi|66519638|ref|XP_623641.1| -1 138 138 intron2 Nvit gi|156551243|ref|XP_001606115.1| -1 22 22 intron3 Nvit gi|156551243|ref|XP_001606115.1| -1 50 50 intron3 Nvit gi|156551243|ref|XP_001606115.1| -1 138 138 intron2 Phum gi|242012069|ref|XP_002426763.1| -1 50 50 intron3 Phum gi|242012069|ref|XP_002426763.1| -1 138 138 intron2 Cbri gi|268581133|ref|XP_002645549.1| -1 18 18 intron3 Cbri gi|268581133|ref|XP_002645549.1| -1 59 59 intron3 Cbri gi|268581133|ref|XP_002645549.1| -1 90 90 intron1 Cbri gi|268581133|ref|XP_002645549.1| -1 141 141 intron2 Bmal gi|170589593|ref|XP_001899558.1| -1 60 60 intron3 Bmal gi|170589593|ref|XP_001899558.1| -1 102 102 intron3 Bmal gi|170589593|ref|XP_001899558.1| -1 142 142 intron2 C169 gnl|Coc_C169_1|38584 -1 11 11 intron3 C169 gnl|Coc_C169_1|38584 -1 34 34 intron1 C169 gnl|Coc_C169_1|38584 -1 76 76 intron3 C169 gnl|Coc_C169_1|38584 -1 91 91 intron3 C169 gnl|Coc_C169_1|38584 -1 102 102 intron2 C169 gnl|Coc_C169_1|38584 -1 111 111 intron3 C169 gnl|Coc_C169_1|38584 -1 146 146 intron2