#| ca.umontreal.iro.evolution.introns.WriteIntronTable Tue Apr 12 01:40:54 EDT 2011 #| System: Mac OS X 10.6.7 x86_64 #| Java: Java HotSpot(TM) 64-Bit Server VM 19.1-b02-334 (1.6.0_24-b07-334-10M3326) mixed mode, Apple Inc. #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/census2010/pipeline/3MCMC/HTML #| Arguments: #| Input alignment: alignments/KOG0693.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Pyoe gi|82539741|ref|XP_724235.1| -1 348 348 intron1 Pfal gi|124506155|ref|XP_001351675.1| -1 347 347 intron1 Pviv gi|156095606|ref|XP_001613838.1| -1 358 358 intron1 Cbri gi|268532384|ref|XP_002631320.1| -1 11 11 intron3 Cbri gi|268532384|ref|XP_002631320.1| -1 105 105 intron2 Cbri gi|268532384|ref|XP_002631320.1| -1 141 141 intron2 Cbri gi|268532384|ref|XP_002631320.1| -1 407 407 intron2 Cele gi|25147617|ref|NP_496499.2| -1 106 106 intron2 Cele gi|25147617|ref|NP_496499.2| -1 411 411 intron2 Apis gi|193678887|ref|XP_001949202.1| -1 46 46 intron3 Apis gi|193678887|ref|XP_001949202.1| -1 161 161 intron3 Apis gi|193678887|ref|XP_001949202.1| -1 280 280 intron3 Apis gi|193678887|ref|XP_001949202.1| -1 479 479 intron1 Mlar gnl|Mellp1|70484 -1 54 54 intron3 Mlar gnl|Mellp1|70484 -1 98 98 intron2 Mlar gnl|Mellp1|70484 -1 146 146 intron1 Mlar gnl|Mellp1|70484 -1 222 222 intron2 Mlar gnl|Mellp1|70484 -1 376 376 intron3 Mlar gnl|Mellp1|70484 -1 465 465 intron2 Mlar gnl|Mellp1|70484 -1 528 528 intron1 Pgra lcl|PGTG_08561 -1 47 47 intron3 Pgra lcl|PGTG_08561 -1 91 91 intron2 Pgra lcl|PGTG_08561 -1 139 139 intron1 Pgra lcl|PGTG_08561 -1 215 215 intron2 Pgra lcl|PGTG_08561 -1 369 369 intron3 Pgra lcl|PGTG_08561 -1 458 458 intron2 Pgra lcl|PGTG_08561 -1 523 523 intron1 Sros gnl|Sporo1|33578 -1 172 172 intron3 Sros gnl|Sporo1|33578 -1 363 363 intron3 Sros gnl|Sporo1|33578 -1 440 440 intron2 Sros gnl|Sporo1|33578 -1 471 471 intron3 Sros gnl|Sporo1|33578 -1 522 522 intron3 Cneo gi|58265488|ref|XP_569900.1| -1 65 65 intron1 Cneo gi|58265488|ref|XP_569900.1| -1 92 92 intron2 Cneo gi|58265488|ref|XP_569900.1| -1 213 213 intron1 Cneo gi|58265488|ref|XP_569900.1| -1 394 394 intron3 Cneo gi|58265488|ref|XP_569900.1| -1 442 442 intron1 Ccin gi|169846152|ref|XP_001829792.1| -1 90 90 intron2 Ccin gi|169846152|ref|XP_001829792.1| -1 518 518 intron1 Lbic gnl|Lacbi1|250381 -1 26 26 intron2 Lbic gnl|Lacbi1|250381 -1 400 400 intron3 Lbic gnl|Lacbi1|250381 -1 459 459 intron1 Fchr gnl|Phchr1|3101 -1 373 373 intron3 Abis gnl|Agabi_varbisH97_2|192199 -1 87 87 intron2 Abis gnl|Agabi_varbisH97_2|192199 -1 460 460 intron3 Abis gnl|Agabi_varbisH97_2|192199 -1 515 515 intron1 Spur gi|115640689|ref|XP_780760.2| -1 33 33 intron3 Spur gi|115640689|ref|XP_780760.2| -1 56 56 intron3 Spur gi|115640689|ref|XP_780760.2| -1 100 100 intron1 Spur gi|115640689|ref|XP_780760.2| -1 178 178 intron3 Spur gi|115640689|ref|XP_780760.2| -1 259 259 intron3 Spur gi|115640689|ref|XP_780760.2| -1 340 340 intron3 Spur gi|115640689|ref|XP_780760.2| -1 432 432 intron1 Spur gi|115640689|ref|XP_780760.2| -1 478 478 intron2 Mbre gi|167517901|ref|XP_001743291.1| -1 52 52 intron3 Mbre gi|167517901|ref|XP_001743291.1| -1 70 70 intron3 Mbre gi|167517901|ref|XP_001743291.1| -1 415 415 intron3 Bmor gnl|Bmor|BGIBMGA007441-PA -1 40 40 intron3 Bmor gnl|Bmor|BGIBMGA007441-PA -1 98 98 intron2 Bmor gnl|Bmor|BGIBMGA007441-PA -1 136 136 intron1 Bmor gnl|Bmor|BGIBMGA007441-PA -1 188 188 intron3 Bmor gnl|Bmor|BGIBMGA007441-PA -1 233 233 intron2 Bmor gnl|Bmor|BGIBMGA007441-PA -1 273 273 intron3 Bmor gnl|Bmor|BGIBMGA007441-PA -1 324 324 intron1 Bmor gnl|Bmor|BGIBMGA007441-PA -1 354 354 intron3 Bmor gnl|Bmor|BGIBMGA007441-PA -1 391 391 intron1 Bmor gnl|Bmor|BGIBMGA007441-PA -1 506 506 intron3 Dmel gi|17137626|ref|NP_477405.1| -1 43 43 intron3 Dmel gi|17137626|ref|NP_477405.1| -1 276 276 intron3 Dmel gi|17137626|ref|NP_477405.1| -1 357 357 intron3 Dmel gi|17137626|ref|NP_477405.1| -1 513 513 intron3 Dmoj gi|195123099|ref|XP_002006047.1| -1 43 43 intron3 Dmoj gi|195123099|ref|XP_002006047.1| -1 276 276 intron3 Dmoj gi|195123099|ref|XP_002006047.1| -1 357 357 intron3 Dmoj gi|195123099|ref|XP_002006047.1| -1 513 513 intron3 Aaeg gi|157132322|ref|XP_001655998.1| -1 39 39 intron3 Aaeg gi|157132322|ref|XP_001655998.1| -1 272 272 intron3 Aaeg gi|157132322|ref|XP_001655998.1| -1 353 353 intron3 Aaeg gi|157132322|ref|XP_001655998.1| -1 390 390 intron1 Aaeg gi|157132322|ref|XP_001655998.1| -1 509 509 intron3 Agam gi|158300873|ref|XP_320685.3| -1 39 39 intron3 Agam gi|158300873|ref|XP_320685.3| -1 272 272 intron3 Ddis gi|66808743|ref|XP_638094.1| -1 463 463 intron2 Dpur gnl|Dicpu1|49721 -1 490 490 intron1 C169 gnl|Coc_C169_1|25841 -1 60 60 intron2 C169 gnl|Coc_C169_1|25841 -1 83 83 intron2 C169 gnl|Coc_C169_1|25841 -1 154 154 intron3 C169 gnl|Coc_C169_1|25841 -1 235 235 intron3 C169 gnl|Coc_C169_1|25841 -1 296 296 intron1 C169 gnl|Coc_C169_1|25841 -1 359 359 intron3 C169 gnl|Coc_C169_1|25841 -1 441 441 intron3 Ppat gi|168055751|ref|XP_001779887.1| -1 64 64 intron2 Ppat gi|168055751|ref|XP_001779887.1| -1 87 87 intron2 Ppat gi|168055751|ref|XP_001779887.1| -1 132 132 intron3 Ppat gi|168055751|ref|XP_001779887.1| -1 215 215 intron2 Ppat gi|168055751|ref|XP_001779887.1| -1 291 291 intron1 Ppat gi|168055751|ref|XP_001779887.1| -1 329 329 intron3 Smoe gnl|Selmo1|270269 -1 64 64 intron2 Smoe gnl|Selmo1|270269 -1 87 87 intron2 Smoe gnl|Selmo1|270269 -1 132 132 intron3 Smoe gnl|Selmo1|270269 -1 215 215 intron2 Smoe gnl|Selmo1|270269 -1 291 291 intron1 Smoe gnl|Selmo1|270269 -1 329 329 intron3 Smoe gnl|Selmo1|270269 -1 388 388 intron3 Smoe gnl|Selmo1|270269 -1 451 451 intron3 Smoe gnl|Selmo1|270269 -1 472 472 intron3 Sbic gi|253761710|ref|XP_002489230.1| -1 63 63 intron2 Sbic gi|253761710|ref|XP_002489230.1| -1 95 95 intron2 Sbic gi|253761710|ref|XP_002489230.1| -1 140 140 intron3 Sbic gi|253761710|ref|XP_002489230.1| -1 223 223 intron2 Sbic gi|253761710|ref|XP_002489230.1| -1 299 299 intron1 Sbic gi|253761710|ref|XP_002489230.1| -1 337 337 intron3 Sbic gi|253761710|ref|XP_002489230.1| -1 396 396 intron3 Sbic gi|253761710|ref|XP_002489230.1| -1 459 459 intron3 Sbic gi|253761710|ref|XP_002489230.1| -1 480 480 intron3 Atha gi|15238080|ref|NP_196579.1| -1 63 63 intron2 Atha gi|15238080|ref|NP_196579.1| -1 86 86 intron2 Atha gi|15238080|ref|NP_196579.1| -1 131 131 intron3 Atha gi|15238080|ref|NP_196579.1| -1 214 214 intron2 Atha gi|15238080|ref|NP_196579.1| -1 290 290 intron1 Atha gi|15238080|ref|NP_196579.1| -1 328 328 intron3 Atha gi|15238080|ref|NP_196579.1| -1 387 387 intron3 Atha gi|15238080|ref|NP_196579.1| -1 450 450 intron3 Atha gi|15238080|ref|NP_196579.1| -1 471 471 intron3 Osat gi|115451283|ref|NP_001049242.1| -1 63 63 intron2 Osat gi|115451283|ref|NP_001049242.1| -1 86 86 intron2 Osat gi|115451283|ref|NP_001049242.1| -1 131 131 intron3 Osat gi|115451283|ref|NP_001049242.1| -1 214 214 intron2 Osat gi|115451283|ref|NP_001049242.1| -1 290 290 intron1 Osat gi|115451283|ref|NP_001049242.1| -1 328 328 intron3 Osat gi|115451283|ref|NP_001049242.1| -1 387 387 intron3 Osat gi|115451283|ref|NP_001049242.1| -1 450 450 intron3 Osat gi|115451283|ref|NP_001049242.1| -1 471 471 intron3 Vvin gi|225438660|ref|XP_002281657.1| -1 63 63 intron2 Vvin gi|225438660|ref|XP_002281657.1| -1 86 86 intron2 Vvin gi|225438660|ref|XP_002281657.1| -1 131 131 intron3 Vvin gi|225438660|ref|XP_002281657.1| -1 214 214 intron2 Vvin gi|225438660|ref|XP_002281657.1| -1 290 290 intron1 Vvin gi|225438660|ref|XP_002281657.1| -1 328 328 intron3 Vvin gi|225438660|ref|XP_002281657.1| -1 387 387 intron3 Vvin gi|225438660|ref|XP_002281657.1| -1 450 450 intron3 Vvin gi|225438660|ref|XP_002281657.1| -1 471 471 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 40 40 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 94 94 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 139 139 intron1 Hsap gi|7705558|ref|NP_057452.1| -1 203 203 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 253 253 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 325 325 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 380 380 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 418 418 intron3 Hsap gi|7705558|ref|NP_057452.1| -1 491 491 intron2 Phum gi|242019698|ref|XP_002430296.1| -1 272 272 intron3 Phum gi|242019698|ref|XP_002430296.1| -1 353 353 intron3 Anid gi|67901276|ref|XP_680894.1| -1 236 236 intron2 Anid gi|67901276|ref|XP_680894.1| -1 361 361 intron1 Mgri gi|145603212|ref|XP_001404384.1| -1 252 252 intron2 Mgri gi|145603212|ref|XP_001404384.1| -1 453 453 intron2 Gzea gi|46136849|ref|XP_390116.1| -1 439 439 intron2 Bfuc gi|154294982|ref|XP_001547929.1| -1 236 236 intron2 Bfuc gi|154294982|ref|XP_001547929.1| -1 326 326 intron1 Sscl gi|156066001|ref|XP_001598922.1| -1 233 233 intron2 Sscl gi|156066001|ref|XP_001598922.1| -1 434 434 intron2 Cimm gi|119191616|ref|XP_001246414.1| -1 223 223 intron3 Cimm gi|119191616|ref|XP_001246414.1| -1 467 467 intron3 Uree gi|258573191|ref|XP_002540777.1| -1 234 234 intron2 Uree gi|258573191|ref|XP_002540777.1| -1 488 488 intron3 Pnod gi|169614137|ref|XP_001800485.1| -1 493 493 intron3 Chet gnl|CocheC5_1|73141 -1 234 234 intron2 Chet gnl|CocheC5_1|73141 -1 492 492 intron3 Prep gi|189198886|ref|XP_001935780.1| -1 234 234 intron2 Pbla gnl|Phybl1|36441 -1 79 79 intron2 Pbla gnl|Phybl1|36441 -1 483 483 intron1 Rory lcl|RO3G_04151 -1 70 70 intron2 Mcir gnl|Mucci2|139095 -1 80 80 intron2 Spun lcl|SPPG_08136T0 -1 71 71 intron2 Spun lcl|SPPG_08136T0 -1 418 418 intron2 Bden lcl|BDEG_03443 -1 439 439 intron2 Isca gi|241998996|ref|XP_002434141.1| -1 98 98 intron3 Isca gi|241998996|ref|XP_002434141.1| -1 200 200 intron1 Isca gi|241998996|ref|XP_002434141.1| -1 273 273 intron3 Isca gi|241998996|ref|XP_002434141.1| -1 381 381 intron3 Fcyl gnl|Fracy1|185965 -1 31 31 intron2 Fcyl gnl|Fracy1|185965 -1 59 59 intron3 Fcyl gnl|Fracy1|185965 -1 73 73 intron2 Tpse gi|224008018|ref|XP_002292968.1| -1 30 30 intron2 Tpse gi|224008018|ref|XP_002292968.1| -1 72 72 intron2 Ftri gi|219116747|ref|XP_002179168.1| -1 30 30 intron2 Ftri gi|219116747|ref|XP_002179168.1| -1 58 58 intron3 Ftri gi|219116747|ref|XP_002179168.1| -1 72 72 intron2 Pcap gnl|PhycaF7|83448 -1 517 517 intron2 Pcap gnl|PhycaF7|83448 -1 551 551 intron3 Tcas gi|91088055|ref|XP_967186.1| -1 36 36 intron3 Tcas gi|91088055|ref|XP_967186.1| -1 179 179 intron3 Tcas gi|91088055|ref|XP_967186.1| -1 345 345 intron3 Tcas gi|91088055|ref|XP_967186.1| -1 382 382 intron1 Amel gi|66546790|ref|XP_623542.1| -1 38 38 intron3 Amel gi|66546790|ref|XP_623542.1| -1 96 96 intron2 Amel gi|66546790|ref|XP_623542.1| -1 185 185 intron3 Amel gi|66546790|ref|XP_623542.1| -1 270 270 intron3 Amel gi|66546790|ref|XP_623542.1| -1 351 351 intron3 Amel gi|66546790|ref|XP_623542.1| -1 388 388 intron1 Amel gi|66546790|ref|XP_623542.1| -1 506 506 intron3 Nvit gi|156555239|ref|XP_001604130.1| -1 43 43 intron3 Nvit gi|156555239|ref|XP_001604130.1| -1 101 101 intron2 Nvit gi|156555239|ref|XP_001604130.1| -1 190 190 intron3 Nvit gi|156555239|ref|XP_001604130.1| -1 275 275 intron3 Nvit gi|156555239|ref|XP_001604130.1| -1 356 356 intron3 Nvit gi|156555239|ref|XP_001604130.1| -1 393 393 intron1 Dpul gnl|Dappu1|198542 -1 38 38 intron3 Dpul gnl|Dappu1|198542 -1 160 160 intron3 Dpul gnl|Dappu1|198542 -1 214 214 intron2 Dpul gnl|Dappu1|198542 -1 271 271 intron3 Dpul gnl|Dappu1|198542 -1 352 352 intron3 Dpul gnl|Dappu1|198542 -1 389 389 intron1 Dpul gnl|Dappu1|198542 -1 464 464 intron3 Lgig gnl|Lotgi1|225722 -1 136 136 intron1 Lgig gnl|Lotgi1|225722 -1 351 351 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 41 41 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 124 124 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 222 222 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 273 273 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 326 326 intron3 Bflo gi|260828353|ref|XP_002609128.1| -1 446 446 intron1 Bflo gi|260828353|ref|XP_002609128.1| -1 492 492 intron2 Nvec gi|156381404|ref|XP_001632255.1| -1 92 92 intron3 Nvec gi|156381404|ref|XP_001632255.1| -1 219 219 intron3 Nvec gi|156381404|ref|XP_001632255.1| -1 270 270 intron3 Nvec gi|156381404|ref|XP_001632255.1| -1 323 323 intron3 Nvec gi|156381404|ref|XP_001632255.1| -1 416 416 intron3 Nvec gi|156381404|ref|XP_001632255.1| -1 489 489 intron2 CspI gnl|Capca1|156627 -1 48 48 intron2 CspI gnl|Capca1|156627 -1 135 135 intron1 CspI gnl|Capca1|156627 -1 310 310 intron3 CspI gnl|Capca1|156627 -1 351 351 intron3