#| ca.umontreal.iro.evolution.introns.WriteIntronTable Tue Apr 12 01:40:56 EDT 2011 #| System: Mac OS X 10.6.7 x86_64 #| Java: Java HotSpot(TM) 64-Bit Server VM 19.1-b02-334 (1.6.0_24-b07-334-10M3326) mixed mode, Apple Inc. #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/census2010/pipeline/3MCMC/HTML #| Arguments: #| Input alignment: alignments/KOG0743.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Crei gi|159485272|ref|XP_001700670.1| -1 10 10 intron3 Crei gi|159485272|ref|XP_001700670.1| -1 74 74 intron2 Crei gi|159485272|ref|XP_001700670.1| -1 99 99 intron3 Crei gi|159485272|ref|XP_001700670.1| -1 165 165 intron2 Crei gi|159485272|ref|XP_001700670.1| -1 261 261 intron2 Crei gi|159485272|ref|XP_001700670.1| -1 305 305 intron1 Crei gi|159485272|ref|XP_001700670.1| -1 343 343 intron2 Crei gi|159485272|ref|XP_001700670.1| -1 414 414 intron3 Crei gi|159485272|ref|XP_001700670.1| -1 445 445 intron1 Crei gi|159485272|ref|XP_001700670.1| -1 479 479 intron1 Ehux gnl|Emihu1|68211 -1 239 239 intron1 Prsp gnl|Prsp1|PTSG_09789T0 -1 189 189 intron3 Prsp gnl|Prsp1|PTSG_09789T0 -1 203 203 intron3 Prsp gnl|Prsp1|PTSG_09789T0 -1 243 243 intron2 Prsp gnl|Prsp1|PTSG_09789T0 -1 261 261 intron3 Prsp gnl|Prsp1|PTSG_09789T0 -1 302 302 intron2 Prsp gnl|Prsp1|PTSG_09789T0 -1 329 329 intron3 Prsp gnl|Prsp1|PTSG_09789T0 -1 364 364 intron1 Prsp gnl|Prsp1|PTSG_09789T0 -1 393 393 intron1 Prsp gnl|Prsp1|PTSG_09789T0 -1 537 537 intron3 Prsp gnl|Prsp1|PTSG_09789T0 -1 565 565 intron2 Prsp gnl|Prsp1|PTSG_09789T0 -1 646 646 intron3 Tgon gi|237835101|ref|XP_002366848.1| -1 51 51 intron2 Tgon gi|237835101|ref|XP_002366848.1| -1 113 113 intron1 Tgon gi|237835101|ref|XP_002366848.1| -1 157 157 intron2 Tgon gi|237835101|ref|XP_002366848.1| -1 189 189 intron1 Tgon gi|237835101|ref|XP_002366848.1| -1 237 237 intron3 Tgon gi|237835101|ref|XP_002366848.1| -1 258 258 intron2 Tgon gi|237835101|ref|XP_002366848.1| -1 282 282 intron1 Tgon gi|237835101|ref|XP_002366848.1| -1 358 358 intron2 Tgon gi|237835101|ref|XP_002366848.1| -1 411 411 intron3 Tgon gi|237835101|ref|XP_002366848.1| -1 429 429 intron2 Tgon gi|237835101|ref|XP_002366848.1| -1 457 457 intron3 Tgon gi|237835101|ref|XP_002366848.1| -1 482 482 intron1 Bmal gi|170585388|ref|XP_001897466.1| -1 21 21 intron3 Bmal gi|170585388|ref|XP_001897466.1| -1 74 74 intron2 Bmal gi|170585388|ref|XP_001897466.1| -1 131 131 intron3 Bmal gi|170585388|ref|XP_001897466.1| -1 159 159 intron1 Bmal gi|170585388|ref|XP_001897466.1| -1 179 179 intron3 Bmal gi|170585388|ref|XP_001897466.1| -1 232 232 intron2 Bmal gi|170585388|ref|XP_001897466.1| -1 294 294 intron3 Bmal gi|170585388|ref|XP_001897466.1| -1 324 324 intron2 Bmal gi|170585388|ref|XP_001897466.1| -1 381 381 intron3 Cbri gi|268530062|ref|XP_002630157.1| -1 75 75 intron2 Cbri gi|268530062|ref|XP_002630157.1| -1 284 284 intron2 Cbri gi|268530062|ref|XP_002630157.1| -1 382 382 intron3 Cele gi|71990335|ref|NP_001022191.1| -1 76 76 intron2 Cele gi|71990335|ref|NP_001022191.1| -1 285 285 intron2 Cele gi|71990335|ref|NP_001022191.1| -1 383 383 intron3 Dpur gnl|Dicpu1|28373 -1 96 96 intron3 Gzea gi|46111775|ref|XP_382945.1| -1 250 250 intron2 Bfuc gi|154314542|ref|XP_001556595.1| -1 59 59 intron1 Chet gnl|CocheC5_1|84033 -1 37 37 intron3 Prep gi|189204650|ref|XP_001938660.1| -1 38 38 intron3 Anid gi|67525347|ref|XP_660735.1| -1 59 59 intron3 Cimm gi|119186825|ref|XP_001244019.1| -1 62 62 intron3 Uree gi|258563506|ref|XP_002582498.1| -1 61 61 intron3 Tadh gi|196006413|ref|XP_002113073.1| -1 85 85 intron2 Tadh gi|196006413|ref|XP_002113073.1| -1 214 214 intron1 Tadh gi|196006413|ref|XP_002113073.1| -1 260 260 intron2 Tadh gi|196006413|ref|XP_002113073.1| -1 302 302 intron2 Tadh gi|196006413|ref|XP_002113073.1| -1 372 372 intron2 Sman gi|256086434|ref|XP_002579404.1| -1 185 185 intron3 Sman gi|256086434|ref|XP_002579404.1| -1 225 225 intron1 Sman gi|256086434|ref|XP_002579404.1| -1 260 260 intron1 Sman gi|256086434|ref|XP_002579404.1| -1 318 318 intron1 Sman gi|256086434|ref|XP_002579404.1| -1 354 354 intron2 Hrob gnl|Helro1|75858 -1 120 120 intron3 Hrob gnl|Helro1|75858 -1 243 243 intron1 Hrob gnl|Helro1|75858 -1 295 295 intron1 Hrob gnl|Helro1|75858 -1 334 334 intron2 Apis gi|193659546|ref|XP_001944577.1| -1 108 108 intron2 Apis gi|193659546|ref|XP_001944577.1| -1 155 155 intron1 Apis gi|193659546|ref|XP_001944577.1| -1 298 298 intron1 Apis gi|193659546|ref|XP_001944577.1| -1 337 337 intron2 CspI gnl|Capca1|169645 -1 246 246 intron1 CspI gnl|Capca1|169645 -1 298 298 intron1 CspI gnl|Capca1|169645 -1 337 337 intron2 Dpul gnl|Dappu1|300604 -1 53 53 intron1 Dpul gnl|Dappu1|300604 -1 108 108 intron2 Dpul gnl|Dappu1|300604 -1 155 155 intron1 Dpul gnl|Dappu1|300604 -1 220 220 intron1 Dpul gnl|Dappu1|300604 -1 234 234 intron1 Dpul gnl|Dappu1|300604 -1 263 263 intron3 Dpul gnl|Dappu1|300604 -1 298 298 intron1 Dpul gnl|Dappu1|300604 -1 363 363 intron1 Isca gi|241561691|ref|XP_002401215.1| -1 37 37 intron3 Isca gi|241561691|ref|XP_002401215.1| -1 107 107 intron2 Isca gi|241561691|ref|XP_002401215.1| -1 154 154 intron1 Isca gi|241561691|ref|XP_002401215.1| -1 219 219 intron1 Isca gi|241561691|ref|XP_002401215.1| -1 240 240 intron2 Isca gi|241561691|ref|XP_002401215.1| -1 297 297 intron1 Phum gi|242007527|ref|XP_002424591.1| -1 109 109 intron2 Phum gi|242007527|ref|XP_002424591.1| -1 156 156 intron1 Phum gi|242007527|ref|XP_002424591.1| -1 221 221 intron1 Phum gi|242007527|ref|XP_002424591.1| -1 299 299 intron1 Phum gi|242007527|ref|XP_002424591.1| -1 338 338 intron2 Phum gi|242007527|ref|XP_002424591.1| -1 384 384 intron3 Nvit gi|156537203|ref|XP_001604777.1| -1 44 44 intron2 Nvit gi|156537203|ref|XP_001604777.1| -1 108 108 intron2 Nvit gi|156537203|ref|XP_001604777.1| -1 155 155 intron1 Nvit gi|156537203|ref|XP_001604777.1| -1 355 355 intron1 Amel gi|66517207|ref|XP_624632.1| -1 44 44 intron2 Amel gi|66517207|ref|XP_624632.1| -1 108 108 intron2 Amel gi|66517207|ref|XP_624632.1| -1 155 155 intron1 Amel gi|66517207|ref|XP_624632.1| -1 220 220 intron1 Amel gi|66517207|ref|XP_624632.1| -1 298 298 intron1 Amel gi|66517207|ref|XP_624632.1| -1 355 355 intron1 Bmor gnl|Bmor|BGIBMGA007726-PA -1 108 108 intron2 Bmor gnl|Bmor|BGIBMGA007726-PA -1 155 155 intron1 Bmor gnl|Bmor|BGIBMGA007726-PA -1 226 226 intron1 Bmor gnl|Bmor|BGIBMGA007726-PA -1 272 272 intron2 Bmor gnl|Bmor|BGIBMGA007726-PA -1 337 337 intron2 Bmor gnl|Bmor|BGIBMGA007726-PA -1 385 385 intron2 Tcas gi|91082057|ref|XP_971798.1| -1 108 108 intron2 Tcas gi|91082057|ref|XP_971798.1| -1 155 155 intron1 Tcas gi|91082057|ref|XP_971798.1| -1 226 226 intron1 Aaeg gi|157128433|ref|XP_001655119.1| -1 155 155 intron1 Nvec gi|156369877|ref|XP_001628200.1| -1 218 218 intron1 Nvec gi|156369877|ref|XP_001628200.1| -1 239 239 intron2 Nvec gi|156369877|ref|XP_001628200.1| -1 306 306 intron3 Lgig gnl|Lotgi1|185574 -1 245 245 intron1 Lgig gnl|Lotgi1|185574 -1 297 297 intron1 Lgig gnl|Lotgi1|185574 -1 336 336 intron2 Hsap gi|4757852|ref|NP_004319.1| -1 107 107 intron2 Hsap gi|4757852|ref|NP_004319.1| -1 154 154 intron1 Hsap gi|4757852|ref|NP_004319.1| -1 219 219 intron1 Hsap gi|4757852|ref|NP_004319.1| -1 240 240 intron2 Hsap gi|4757852|ref|NP_004319.1| -1 297 297 intron1 Hsap gi|4757852|ref|NP_004319.1| -1 336 336 intron2 Drer gi|124430735|ref|NP_957476.2| -1 107 107 intron2 Drer gi|124430735|ref|NP_957476.2| -1 154 154 intron1 Drer gi|124430735|ref|NP_957476.2| -1 219 219 intron1 Drer gi|124430735|ref|NP_957476.2| -1 240 240 intron2 Drer gi|124430735|ref|NP_957476.2| -1 298 298 intron1 Drer gi|124430735|ref|NP_957476.2| -1 337 337 intron2 Ggal gi|57529742|ref|NP_001006520.1| -1 107 107 intron2 Ggal gi|57529742|ref|NP_001006520.1| -1 154 154 intron1 Ggal gi|57529742|ref|NP_001006520.1| -1 219 219 intron1 Ggal gi|57529742|ref|NP_001006520.1| -1 240 240 intron2 Ggal gi|57529742|ref|NP_001006520.1| -1 297 297 intron1 Ggal gi|57529742|ref|NP_001006520.1| -1 336 336 intron2 Tgut gi|224054775|ref|XP_002194741.1| -1 107 107 intron2 Tgut gi|224054775|ref|XP_002194741.1| -1 154 154 intron1 Tgut gi|224054775|ref|XP_002194741.1| -1 219 219 intron1 Tgut gi|224054775|ref|XP_002194741.1| -1 240 240 intron2 Tgut gi|224054775|ref|XP_002194741.1| -1 297 297 intron1 Tgut gi|224054775|ref|XP_002194741.1| -1 336 336 intron2 Spur gi|72012723|ref|XP_784444.1| -1 107 107 intron2 Spur gi|72012723|ref|XP_784444.1| -1 154 154 intron1 Spur gi|72012723|ref|XP_784444.1| -1 219 219 intron1 Spur gi|72012723|ref|XP_784444.1| -1 240 240 intron2 Spur gi|72012723|ref|XP_784444.1| -1 297 297 intron1 Spur gi|72012723|ref|XP_784444.1| -1 334 334 intron2 Bflo gi|260817136|ref|XP_002603443.1| -1 58 58 intron3 Bflo gi|260817136|ref|XP_002603443.1| -1 107 107 intron2 Bflo gi|260817136|ref|XP_002603443.1| -1 154 154 intron1 Bflo gi|260817136|ref|XP_002603443.1| -1 219 219 intron1 Bflo gi|260817136|ref|XP_002603443.1| -1 240 240 intron2 Bflo gi|260817136|ref|XP_002603443.1| -1 297 297 intron1 Bflo gi|260817136|ref|XP_002603443.1| -1 336 336 intron2 Bflo gi|260817136|ref|XP_002603443.1| -1 395 395 intron3 Mlar gnl|Mellp1|65472 -1 51 51 intron1 Mlar gnl|Mellp1|65472 -1 59 59 intron1 Mlar gnl|Mellp1|65472 -1 192 192 intron3 Mlar gnl|Mellp1|65472 -1 297 297 intron1 Mlar gnl|Mellp1|65472 -1 374 374 intron2 Pgra lcl|PGTG_19037 -1 8 8 intron2 Pgra lcl|PGTG_19037 -1 30 30 intron1 Pgra lcl|PGTG_19037 -1 112 112 intron2 Pgra lcl|PGTG_19037 -1 122 122 intron3 Pgra lcl|PGTG_19037 -1 216 216 intron3 Pgra lcl|PGTG_19037 -1 322 322 intron1 Pgra lcl|PGTG_19037 -1 399 399 intron2 Cneo gi|58264994|ref|XP_569653.1| -1 66 66 intron2 Cneo gi|58264994|ref|XP_569653.1| -1 76 76 intron3 Cneo gi|58264994|ref|XP_569653.1| -1 186 186 intron3 Cneo gi|58264994|ref|XP_569653.1| -1 291 291 intron1 Cneo gi|58264994|ref|XP_569653.1| -1 370 370 intron2 Sros gnl|Sporo1|20402 -1 1 1 intron3 Sros gnl|Sporo1|20402 -1 48 48 intron2 Sros gnl|Sporo1|20402 -1 92 92 intron3 Sros gnl|Sporo1|20402 -1 197 197 intron1 Sros gnl|Sporo1|20402 -1 276 276 intron2 Abis gnl|Agabi_varbisH97_2|63145 -1 100 100 intron3 Abis gnl|Agabi_varbisH97_2|63145 -1 204 204 intron1 Abis gnl|Agabi_varbisH97_2|63145 -1 283 283 intron2 Fchr gnl|Phchr1|132477 -1 11 11 intron3 Fchr gnl|Phchr1|132477 -1 116 116 intron3 Fchr gnl|Phchr1|132477 -1 221 221 intron1 Fchr gnl|Phchr1|132477 -1 300 300 intron2 Fchr gnl|Phchr1|132477 -1 388 388 intron1 Fchr gnl|Phchr1|132477 -1 398 398 intron3 Ccin gi|169852874|ref|XP_001833119.1| -1 103 103 intron3 Ccin gi|169852874|ref|XP_001833119.1| -1 208 208 intron1 Ccin gi|169852874|ref|XP_001833119.1| -1 287 287 intron2 Lbic gnl|Lacbi1|187928 -1 1 1 intron3 Lbic gnl|Lacbi1|187928 -1 107 107 intron3 Lbic gnl|Lacbi1|187928 -1 212 212 intron1 Lbic gnl|Lacbi1|187928 -1 291 291 intron2 Amac lcl|AMAG_00161T0 -1 131 131 intron3 Amac lcl|AMAG_00161T0 -1 236 236 intron1 Amac lcl|AMAG_00161T0 -1 282 282 intron2 Bden lcl|BDEG_03024 -1 14 14 intron2 Bden lcl|BDEG_03024 -1 133 133 intron3 Spun lcl|SPPG_01552T0 -1 23 23 intron2 Spun lcl|SPPG_01552T0 -1 120 120 intron3 Spun lcl|SPPG_01552T0 -1 225 225 intron1 Spun lcl|SPPG_01552T0 -1 304 304 intron2 Pbla gnl|Phybl1|14608 -1 281 281 intron3 Rory lcl|RO3G_02624 -1 263 263 intron3 Mcir gnl|Mucci2|72214 -1 20 20 intron3 Mcir gnl|Mucci2|72214 -1 267 267 intron3