#| ca.umontreal.iro.evolution.introns.WriteIntronTable Tue Apr 12 01:40:56 EDT 2011 #| System: Mac OS X 10.6.7 x86_64 #| Java: Java HotSpot(TM) 64-Bit Server VM 19.1-b02-334 (1.6.0_24-b07-334-10M3326) mixed mode, Apple Inc. #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/census2010/pipeline/3MCMC/HTML #| Arguments: #| Input alignment: alignments/KOG0815.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Ehux gnl|Emihu1|253403 -1 81 81 intron3 Tgon gi|237842661|ref|XP_002370628.1| -1 197 197 intron1 Otau gnl|Ostta4|23034 -1 41 41 intron3 O809 gnl|OstRCC809_2|65922 -1 44 44 intron3 Oluc gi|145356478|ref|XP_001422456.1| -1 44 44 intron3 M299 gi|255087320|ref|XP_002505583.1| -1 45 45 intron3 Mpus gnl|MicpuC2|48999 -1 45 45 intron3 Crei gi|159477927|ref|XP_001697060.1| -1 13 13 intron3 Crei gi|159477927|ref|XP_001697060.1| -1 46 46 intron3 Crei gi|159477927|ref|XP_001697060.1| -1 105 105 intron3 Crei gi|159477927|ref|XP_001697060.1| -1 272 272 intron3 Vcar gnl|Volca1|84328 -1 13 13 intron3 Vcar gnl|Volca1|84328 -1 46 46 intron3 Vcar gnl|Volca1|84328 -1 105 105 intron3 Vcar gnl|Volca1|84328 -1 199 199 intron3 Vcar gnl|Volca1|84328 -1 272 272 intron3 C169 gnl|Coc_C169_1|52908 -1 12 12 intron3 C169 gnl|Coc_C169_1|52908 -1 45 45 intron3 C169 gnl|Coc_C169_1|52908 -1 101 101 intron3 C169 gnl|Coc_C169_1|52908 -1 143 143 intron3 C169 gnl|Coc_C169_1|52908 -1 195 195 intron3 C169 gnl|Coc_C169_1|52908 -1 268 268 intron3 C169 gnl|Coc_C169_1|52908 -1 311 311 intron3 C64A gnl|ChlNC64A_1|59607 -1 12 12 intron3 C64A gnl|ChlNC64A_1|59607 -1 45 45 intron3 C64A gnl|ChlNC64A_1|59607 -1 99 99 intron3 C64A gnl|ChlNC64A_1|59607 -1 141 141 intron3 C64A gnl|ChlNC64A_1|59607 -1 204 204 intron3 C64A gnl|ChlNC64A_1|59607 -1 266 266 intron3 Vvin gi|225434640|ref|XP_002279500.1| -1 36 36 intron1 Vvin gi|225434640|ref|XP_002279500.1| -1 51 51 intron3 Vvin gi|225434640|ref|XP_002279500.1| -1 74 74 intron3 Vvin gi|225434640|ref|XP_002279500.1| -1 107 107 intron3 Vvin gi|225434640|ref|XP_002279500.1| -1 238 238 intron3 Smoe gnl|Selmo1|437282 -1 86 86 intron3 Smoe gnl|Selmo1|437282 -1 109 109 intron3 Smoe gnl|Selmo1|437282 -1 142 142 intron3 Smoe gnl|Selmo1|437282 -1 273 273 intron3 Atha gi|145332006|ref|NP_001078125.1| -1 29 29 intron3 Atha gi|145332006|ref|NP_001078125.1| -1 52 52 intron3 Atha gi|145332006|ref|NP_001078125.1| -1 75 75 intron3 Atha gi|145332006|ref|NP_001078125.1| -1 108 108 intron3 Atha gi|145332006|ref|NP_001078125.1| -1 239 239 intron3 Ppat gi|168014623|ref|XP_001759851.1| -1 86 86 intron3 Ppat gi|168014623|ref|XP_001759851.1| -1 142 142 intron3 Sbic gi|242088805|ref|XP_002440235.1| -1 109 109 intron3 Sbic gi|242088805|ref|XP_002440235.1| -1 142 142 intron3 Sbic gi|242088805|ref|XP_002440235.1| -1 273 273 intron3 Osat gi|115484045|ref|NP_001065684.1| -1 86 86 intron3 Osat gi|115484045|ref|NP_001065684.1| -1 109 109 intron3 Osat gi|115484045|ref|NP_001065684.1| -1 142 142 intron3 Osat gi|115484045|ref|NP_001065684.1| -1 273 273 intron3 Sman gi|256072222|ref|XP_002572435.1| -1 191 191 intron3 Sman gi|256072222|ref|XP_002572435.1| -1 264 264 intron3 Prsp lcl|PTSG_02259T0 -1 75 75 intron2 Prsp lcl|PTSG_02259T0 -1 308 308 intron1 Spun lcl|SPPG_01926T0 -1 6 6 intron1 Spun lcl|SPPG_01926T0 -1 264 264 intron3 Bden lcl|BDEG_03513 -1 6 6 intron1 Bden lcl|BDEG_03513 -1 265 265 intron3 Sjap gi|213410301|ref|XP_002175920.1| -1 262 262 intron3 Spom gi|19075893|ref|NP_588393.1| -1 262 262 intron3 Mgri gi|39944970|ref|XP_362022.1| -1 58 58 intron3 Gzea gi|46124899|ref|XP_387003.1| -1 57 57 intron3 Gzea gi|46124899|ref|XP_387003.1| -1 310 310 intron2 Bfuc gi|154297648|ref|XP_001549250.1| -1 58 58 intron3 Sscl gi|156031005|ref|XP_001584828.1| -1 58 58 intron3 Ncra gi|85089944|ref|XP_958183.1| -1 58 58 intron3 Ncra gi|85089944|ref|XP_958183.1| -1 312 312 intron2 Anid gi|67524553|ref|XP_660338.1| -1 58 58 intron3 Anid gi|67524553|ref|XP_660338.1| -1 82 82 intron1 Cimm gi|119189673|ref|XP_001245443.1| -1 58 58 intron3 Cimm gi|119189673|ref|XP_001245443.1| -1 82 82 intron1 Cimm gi|119189673|ref|XP_001245443.1| -1 306 306 intron1 Uree gi|258565907|ref|XP_002583698.1| -1 58 58 intron3 Uree gi|258565907|ref|XP_002583698.1| -1 82 82 intron1 Uree gi|258565907|ref|XP_002583698.1| -1 305 305 intron1 Mfij gnl|Mycfi1|51867 -1 58 58 intron3 Mgra gnl|Mycgr3|104664 -1 58 58 intron3 Chet gnl|CocheC5_1|25037 -1 82 82 intron1 Chet gnl|CocheC5_1|25037 -1 126 126 intron2 Pnod gi|169623979|ref|XP_001805396.1| -1 82 82 intron1 Pnod gi|169623979|ref|XP_001805396.1| -1 126 126 intron2 Prep gi|189203257|ref|XP_001937964.1| -1 82 82 intron1 Prep gi|189203257|ref|XP_001937964.1| -1 126 126 intron2 Sros gnl|Sporo1|29082 -1 23 23 intron1 Sros gnl|Sporo1|29082 -1 182 182 intron2 Sros gnl|Sporo1|29082 -1 304 304 intron1 Mlar gnl|Mellp1|73814 -1 9 9 intron1 Mlar gnl|Mellp1|73814 -1 144 144 intron3 Mlar gnl|Mellp1|73814 -1 270 270 intron1 Pgra lcl|PGTG_06188 -1 9 9 intron1 Pgra lcl|PGTG_06188 -1 144 144 intron3 Pgra lcl|PGTG_06188 -1 270 270 intron1 Pgra lcl|PGTG_06188 -1 313 313 intron1 Cneo gi|58269216|ref|XP_571764.1| -1 23 23 intron1 Cneo gi|58269216|ref|XP_571764.1| -1 262 262 intron3 Cneo gi|58269216|ref|XP_571764.1| -1 306 306 intron3 Abis gnl|Agabi_varbisH97_2|191238 -1 23 23 intron1 Abis gnl|Agabi_varbisH97_2|191238 -1 262 262 intron3 Abis gnl|Agabi_varbisH97_2|191238 -1 306 306 intron3 Ccin gi|169859703|ref|XP_001836489.1| -1 23 23 intron1 Ccin gi|169859703|ref|XP_001836489.1| -1 246 246 intron2 Ccin gi|169859703|ref|XP_001836489.1| -1 295 295 intron3 Lbic gnl|Lacbi1|294204 -1 23 23 intron1 Lbic gnl|Lacbi1|294204 -1 262 262 intron3 Lbic gnl|Lacbi1|294204 -1 306 306 intron3 Fchr gnl|Phchr1|130203 -1 1 1 intron3 Fchr gnl|Phchr1|130203 -1 23 23 intron1 Fchr gnl|Phchr1|130203 -1 262 262 intron3 Fchr gnl|Phchr1|130203 -1 307 307 intron3 Fchr gnl|Phchr1|130203 -1 313 313 intron3 Spur gi|72145771|ref|XP_794024.1| -1 20 20 intron3 Spur gi|72145771|ref|XP_794024.1| -1 111 111 intron3 Hmag gi|221122411|ref|XP_002166296.1| -1 77 77 intron2 Hmag gi|221122411|ref|XP_002166296.1| -1 166 166 intron3 Hmag gi|221122411|ref|XP_002166296.1| -1 217 217 intron3 Hmag gi|221122411|ref|XP_002166296.1| -1 246 246 intron3 Hmag gi|221122411|ref|XP_002166296.1| -1 264 264 intron3 Bmal gi|170585945|ref|XP_001897742.1| -1 49 49 intron1 Bmal gi|170585945|ref|XP_001897742.1| -1 107 107 intron3 Bmal gi|170585945|ref|XP_001897742.1| -1 191 191 intron3 Bmal gi|170585945|ref|XP_001897742.1| -1 264 264 intron3 Cbri gi|268566771|ref|XP_002639809.1| -1 49 49 intron1 Cbri gi|268566771|ref|XP_002639809.1| -1 157 157 intron3 Cele gi|17506815|ref|NP_492766.1| -1 49 49 intron1 Cele gi|17506815|ref|NP_492766.1| -1 157 157 intron3 Cint gi|198434931|ref|XP_002128891.1| -1 18 18 intron3 Cint gi|198434931|ref|XP_002128891.1| -1 77 77 intron2 Cint gi|198434931|ref|XP_002128891.1| -1 106 106 intron3 Cint gi|198434931|ref|XP_002128891.1| -1 155 155 intron3 Cint gi|198434931|ref|XP_002128891.1| -1 192 192 intron1 Cint gi|198434931|ref|XP_002128891.1| -1 264 264 intron3 Drer gi|18859323|ref|NP_571655.1| -1 18 18 intron3 Drer gi|18859323|ref|NP_571655.1| -1 77 77 intron2 Drer gi|18859323|ref|NP_571655.1| -1 106 106 intron3 Drer gi|18859323|ref|NP_571655.1| -1 155 155 intron3 Drer gi|18859323|ref|NP_571655.1| -1 217 217 intron3 Drer gi|18859323|ref|NP_571655.1| -1 264 264 intron3 Hsap gi|4506667|ref|NP_000993.1| -1 18 18 intron3 Hsap gi|4506667|ref|NP_000993.1| -1 77 77 intron2 Hsap gi|4506667|ref|NP_000993.1| -1 106 106 intron3 Hsap gi|4506667|ref|NP_000993.1| -1 155 155 intron3 Hsap gi|4506667|ref|NP_000993.1| -1 217 217 intron3 Hsap gi|4506667|ref|NP_000993.1| -1 264 264 intron3 Ggal gi|45384494|ref|NP_990318.1| -1 18 18 intron3 Ggal gi|45384494|ref|NP_990318.1| -1 77 77 intron2 Ggal gi|45384494|ref|NP_990318.1| -1 106 106 intron3 Ggal gi|45384494|ref|NP_990318.1| -1 155 155 intron3 Ggal gi|45384494|ref|NP_990318.1| -1 217 217 intron3 Tgut gi|224071968|ref|XP_002199561.1| -1 18 18 intron3 Tgut gi|224071968|ref|XP_002199561.1| -1 77 77 intron2 Tgut gi|224071968|ref|XP_002199561.1| -1 106 106 intron3 Tgut gi|224071968|ref|XP_002199561.1| -1 155 155 intron3 Tgut gi|224071968|ref|XP_002199561.1| -1 217 217 intron3 Tgut gi|224071968|ref|XP_002199561.1| -1 264 264 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 3 3 intron2 Tadh gi|196010133|ref|XP_002114931.1| -1 18 18 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 52 52 intron1 Tadh gi|196010133|ref|XP_002114931.1| -1 77 77 intron2 Tadh gi|196010133|ref|XP_002114931.1| -1 106 106 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 155 155 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 192 192 intron1 Tadh gi|196010133|ref|XP_002114931.1| -1 217 217 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 246 246 intron3 Tadh gi|196010133|ref|XP_002114931.1| -1 264 264 intron3 Bflo gi|260806040|ref|XP_002597893.1| -1 18 18 intron3 Bflo gi|260806040|ref|XP_002597893.1| -1 52 52 intron1 Bflo gi|260806040|ref|XP_002597893.1| -1 77 77 intron2 Bflo gi|260806040|ref|XP_002597893.1| -1 106 106 intron3 Bflo gi|260806040|ref|XP_002597893.1| -1 155 155 intron3 Bflo gi|260806040|ref|XP_002597893.1| -1 192 192 intron1 Bflo gi|260806040|ref|XP_002597893.1| -1 217 217 intron3 Bflo gi|260806040|ref|XP_002597893.1| -1 264 264 intron3 Nvec gi|156364314|ref|XP_001626294.1| -1 18 18 intron3 Nvec gi|156364314|ref|XP_001626294.1| -1 77 77 intron2 Nvec gi|156364314|ref|XP_001626294.1| -1 192 192 intron1 Nvec gi|156364314|ref|XP_001626294.1| -1 217 217 intron3 Nvec gi|156364314|ref|XP_001626294.1| -1 246 246 intron3 Nvec gi|156364314|ref|XP_001626294.1| -1 264 264 intron3 CspI gnl|Capca1|167366 -1 18 18 intron3 CspI gnl|Capca1|167366 -1 52 52 intron1 CspI gnl|Capca1|167366 -1 155 155 intron3 CspI gnl|Capca1|167366 -1 301 301 intron3 Hrob gnl|Helro1|185645 -1 18 18 intron3 Hrob gnl|Helro1|185645 -1 52 52 intron1 Hrob gnl|Helro1|185645 -1 77 77 intron2 Hrob gnl|Helro1|185645 -1 166 166 intron3 Hrob gnl|Helro1|185645 -1 217 217 intron3 Hrob gnl|Helro1|185645 -1 270 270 intron2 Lgig gnl|Lotgi1|237709 -1 18 18 intron3 Lgig gnl|Lotgi1|237709 -1 52 52 intron1 Lgig gnl|Lotgi1|237709 -1 77 77 intron2 Lgig gnl|Lotgi1|237709 -1 106 106 intron3 Lgig gnl|Lotgi1|237709 -1 155 155 intron3 Lgig gnl|Lotgi1|237709 -1 192 192 intron1 Lgig gnl|Lotgi1|237709 -1 217 217 intron3 Lgig gnl|Lotgi1|237709 -1 264 264 intron3 Isca gi|241556143|ref|XP_002399611.1| -1 191 191 intron3 Isca gi|241556143|ref|XP_002399611.1| -1 264 264 intron3 Dpul gnl|Dappu1|307348 -1 18 18 intron3 Dpul gnl|Dappu1|307348 -1 77 77 intron2 Dpul gnl|Dappu1|307348 -1 155 155 intron3 Dpul gnl|Dappu1|307348 -1 217 217 intron3 Phum gi|242008432|ref|XP_002425010.1| -1 18 18 intron3 Phum gi|242008432|ref|XP_002425010.1| -1 77 77 intron2 Phum gi|242008432|ref|XP_002425010.1| -1 155 155 intron3 Phum gi|242008432|ref|XP_002425010.1| -1 217 217 intron3 Phum gi|242008432|ref|XP_002425010.1| -1 270 270 intron3 Apis gi|187117172|ref|NP_001119687.1| -1 18 18 intron3 Apis gi|187117172|ref|NP_001119687.1| -1 94 94 intron1 Apis gi|187117172|ref|NP_001119687.1| -1 136 136 intron1 Apis gi|187117172|ref|NP_001119687.1| -1 198 198 intron1 Apis gi|187117172|ref|NP_001119687.1| -1 251 251 intron1 Dmel gi|17737731|ref|NP_524211.1| -1 18 18 intron3 Dmoj gi|195129029|ref|XP_002008961.1| -1 18 18 intron3 Bmor gnl|Bmor|BGIBMGA003309-PA -1 18 18 intron3 Bmor gnl|Bmor|BGIBMGA003309-PA -1 97 97 intron3 Bmor gnl|Bmor|BGIBMGA003309-PA -1 150 150 intron1 Bmor gnl|Bmor|BGIBMGA003309-PA -1 191 191 intron3 Bmor gnl|Bmor|BGIBMGA003309-PA -1 270 270 intron3 Tcas gi|91093667|ref|XP_975936.1| -1 18 18 intron3 Tcas gi|91093667|ref|XP_975936.1| -1 270 270 intron3 Amel gi|66559310|ref|XP_623106.1| -1 18 18 intron3 Amel gi|66559310|ref|XP_623106.1| -1 155 155 intron3 Amel gi|66559310|ref|XP_623106.1| -1 270 270 intron3 Nvit gi|156543342|ref|XP_001607606.1| -1 18 18 intron3 Nvit gi|156543342|ref|XP_001607606.1| -1 155 155 intron3 Nvit gi|156543342|ref|XP_001607606.1| -1 270 270 intron3 Aaeg gi|157127511|ref|XP_001655016.1| -1 18 18 intron3 Agam gi|31208765|ref|XP_313349.1| -1 18 18 intron3