#| ca.umontreal.iro.evolution.introns.WriteIntronTable Tue Apr 12 01:40:57 EDT 2011 #| System: Mac OS X 10.6.7 x86_64 #| Java: Java HotSpot(TM) 64-Bit Server VM 19.1-b02-334 (1.6.0_24-b07-334-10M3326) mixed mode, Apple Inc. #| Current directory: /Users/csuros/Work/introns/larger-data/denovo/census2010/pipeline/3MCMC/HTML #| Arguments: #| Input alignment: alignments/KOG0840.faa #| Intron position list parenthesis: {i .. i} #| Intron positions are relative to: sequence intron1 0,100,200 intron2 0,80,160 intron3 0,50,100 Pviv gi|156101828|ref|XP_001616607.1| -1 249 249 intron2 Pviv gi|156101828|ref|XP_001616607.1| -1 1065 1065 intron3 Fcyl gnl|Fracy1|271905 -1 79 79 intron1 M299 gi|255070963|ref|XP_002507563.1| -1 104 104 intron3 Mpus gnl|MicpuC2|55668 -1 116 116 intron3 Vcar gnl|Volca1|103638 -1 119 119 intron1 Vcar gnl|Volca1|103638 -1 190 190 intron3 Vcar gnl|Volca1|103638 -1 259 259 intron3 Vcar gnl|Volca1|103638 -1 306 306 intron1 Crei gi|159465135|ref|XP_001690778.1| -1 114 114 intron1 Crei gi|159465135|ref|XP_001690778.1| -1 185 185 intron3 Crei gi|159465135|ref|XP_001690778.1| -1 254 254 intron3 Crei gi|159465135|ref|XP_001690778.1| -1 301 301 intron1 C64A gnl|ChlNC64A_1|142728 -1 68 68 intron2 C64A gnl|ChlNC64A_1|142728 -1 91 91 intron3 C64A gnl|ChlNC64A_1|142728 -1 114 114 intron3 C64A gnl|ChlNC64A_1|142728 -1 220 220 intron3 C64A gnl|ChlNC64A_1|142728 -1 252 252 intron2 C169 gnl|Coc_C169_1|25295 -1 4 4 intron2 C169 gnl|Coc_C169_1|25295 -1 27 27 intron3 C169 gnl|Coc_C169_1|25295 -1 50 50 intron3 C169 gnl|Coc_C169_1|25295 -1 74 74 intron3 C169 gnl|Coc_C169_1|25295 -1 156 156 intron3 C169 gnl|Coc_C169_1|25295 -1 190 190 intron3 Sbic gi|242053033|ref|XP_002455662.1| -1 92 92 intron3 Sbic gi|242053033|ref|XP_002455662.1| -1 131 131 intron1 Sbic gi|242053033|ref|XP_002455662.1| -1 189 189 intron3 Sbic gi|242053033|ref|XP_002455662.1| -1 221 221 intron3 Osat gi|115436866|ref|NP_001043155.1| -1 93 93 intron3 Osat gi|115436866|ref|NP_001043155.1| -1 132 132 intron1 Osat gi|115436866|ref|NP_001043155.1| -1 190 190 intron3 Osat gi|115436866|ref|NP_001043155.1| -1 222 222 intron3 Atha gi|18408572|ref|NP_564880.1| -1 101 101 intron3 Atha gi|18408572|ref|NP_564880.1| -1 140 140 intron1 Atha gi|18408572|ref|NP_564880.1| -1 198 198 intron3 Atha gi|18408572|ref|NP_564880.1| -1 230 230 intron3 Vvin gi|225453100|ref|XP_002271649.1| -1 97 97 intron3 Vvin gi|225453100|ref|XP_002271649.1| -1 136 136 intron1 Vvin gi|225453100|ref|XP_002271649.1| -1 194 194 intron3 Vvin gi|225453100|ref|XP_002271649.1| -1 226 226 intron3 Smoe gnl|Selmo1|71251 -1 18 18 intron3 Smoe gnl|Selmo1|71251 -1 57 57 intron1 Smoe gnl|Selmo1|71251 -1 115 115 intron3 Smoe gnl|Selmo1|71251 -1 147 147 intron3 Sros gnl|Sporo1|13103 -1 23 23 intron3 Sros gnl|Sporo1|13103 -1 67 67 intron3 Sros gnl|Sporo1|13103 -1 94 94 intron1 Sros gnl|Sporo1|13103 -1 111 111 intron1 Sros gnl|Sporo1|13103 -1 126 126 intron3 Sros gnl|Sporo1|13103 -1 141 141 intron1 Sros gnl|Sporo1|13103 -1 160 160 intron1 Sman gi|256074339|ref|XP_002573483.1| -1 109 109 intron1 Sman gi|256074339|ref|XP_002573483.1| -1 172 172 intron1 Sman gi|256074339|ref|XP_002573483.1| -1 204 204 intron3 Sman gi|256074339|ref|XP_002573483.1| -1 242 242 intron3 Sman gi|256074339|ref|XP_002573483.1| -1 345 345 intron3 Sman gi|256074339|ref|XP_002573483.1| -1 414 414 intron3 Sman gi|256074339|ref|XP_002573483.1| -1 500 500 intron1 Sman gi|256074339|ref|XP_002573483.1| -1 549 549 intron3 Mgri gi|39977745|ref|XP_370260.1| -1 56 56 intron3 Mgri gi|39977745|ref|XP_370260.1| -1 63 63 intron1 Gzea gi|46110353|ref|XP_382234.1| -1 13 13 intron1 Pgra lcl|PGTG_00169 -1 86 86 intron3 Pgra lcl|PGTG_00169 -1 111 111 intron3 Pgra lcl|PGTG_00169 -1 114 114 intron2 Pgra lcl|PGTG_00169 -1 130 130 intron3 Pgra lcl|PGTG_00169 -1 174 174 intron1 Pgra lcl|PGTG_00169 -1 223 223 intron1 Cowc lcl|CAOG_06442T0 -1 9 9 intron3 Cowc lcl|CAOG_06442T0 -1 69 69 intron3 Cowc lcl|CAOG_06442T0 -1 93 93 intron3 Cowc lcl|CAOG_06442T0 -1 224 224 intron1 Amac gnl|Amac3|AMAG_04899T0 -1 68 68 intron3 Amac gnl|Amac3|AMAG_04899T0 -1 137 137 intron3 Amac gnl|Amac3|AMAG_04899T0 -1 164 164 intron1 Amac gnl|Amac3|AMAG_04899T0 -1 223 223 intron1 Pnod gi|169625037|ref|XP_001805923.1| -1 34 34 intron3 Chet gnl|CocheC5_1|87913 -1 59 59 intron3 Prep gi|189200839|ref|XP_001936756.1| -1 50 50 intron3 Mgra gnl|Mycgr3|88062 -1 17 17 intron1 Sscl gi|156037438|ref|XP_001586446.1| -1 5 5 intron3 Sscl gi|156037438|ref|XP_001586446.1| -1 12 12 intron1 Sscl gi|156037438|ref|XP_001586446.1| -1 20 20 intron3 Anid gi|67525029|ref|XP_660576.1| -1 130 130 intron2 Cimm gi|119177332|ref|XP_001240455.1| -1 44 44 intron3 Cimm gi|119177332|ref|XP_001240455.1| -1 51 51 intron1 Cimm gi|119177332|ref|XP_001240455.1| -1 59 59 intron3 Cimm gi|119177332|ref|XP_001240455.1| -1 107 107 intron1 Uree gi|258564300|ref|XP_002582895.1| -1 44 44 intron3 Uree gi|258564300|ref|XP_002582895.1| -1 92 92 intron1 Cneo gi|58262368|ref|XP_568594.1| -1 63 63 intron3 Cneo gi|58262368|ref|XP_568594.1| -1 86 86 intron3 Cneo gi|58262368|ref|XP_568594.1| -1 175 175 intron1 Fchr gnl|Phchr1|125471 -1 30 30 intron3 Fchr gnl|Phchr1|125471 -1 54 54 intron3 Fchr gnl|Phchr1|125471 -1 78 78 intron3 Fchr gnl|Phchr1|125471 -1 123 123 intron3 Fchr gnl|Phchr1|125471 -1 174 174 intron1 Fchr gnl|Phchr1|125471 -1 223 223 intron1 Fchr gnl|Phchr1|125471 -1 234 234 intron1 Fchr gnl|Phchr1|125471 -1 252 252 intron3 Abis gnl|Agabi_varbisH97_2|198431 -1 50 50 intron3 Abis gnl|Agabi_varbisH97_2|198431 -1 74 74 intron3 Abis gnl|Agabi_varbisH97_2|198431 -1 128 128 intron3 Abis gnl|Agabi_varbisH97_2|198431 -1 170 170 intron1 Abis gnl|Agabi_varbisH97_2|198431 -1 219 219 intron1 Abis gnl|Agabi_varbisH97_2|198431 -1 230 230 intron1 Ccin gi|169843532|ref|XP_001828495.1| -1 6 6 intron3 Ccin gi|169843532|ref|XP_001828495.1| -1 30 30 intron3 Ccin gi|169843532|ref|XP_001828495.1| -1 75 75 intron3 Ccin gi|169843532|ref|XP_001828495.1| -1 77 77 intron3 Ccin gi|169843532|ref|XP_001828495.1| -1 119 119 intron1 Ccin gi|169843532|ref|XP_001828495.1| -1 168 168 intron1 Ccin gi|169843532|ref|XP_001828495.1| -1 179 179 intron1 Lbic gnl|Lacbi1|227802 -1 52 52 intron3 Lbic gnl|Lacbi1|227802 -1 76 76 intron3 Lbic gnl|Lacbi1|227802 -1 121 121 intron3 Lbic gnl|Lacbi1|227802 -1 123 123 intron3 Lbic gnl|Lacbi1|227802 -1 165 165 intron1 Lbic gnl|Lacbi1|227802 -1 209 209 intron1 Lbic gnl|Lacbi1|227802 -1 218 218 intron1 Spun lcl|SPPG_04614T0 -1 44 44 intron3 Spun lcl|SPPG_04614T0 -1 108 108 intron3 Spun lcl|SPPG_04614T0 -1 113 113 intron3 Spun lcl|SPPG_04614T0 -1 115 115 intron3 Spun lcl|SPPG_04614T0 -1 159 159 intron2 Spun lcl|SPPG_04614T0 -1 199 199 intron1 Bden lcl|BDEG_06687 -1 28 28 intron3 Bden lcl|BDEG_06687 -1 92 92 intron3 Bden lcl|BDEG_06687 -1 94 94 intron3 Bden lcl|BDEG_06687 -1 147 147 intron2 Bden lcl|BDEG_06687 -1 187 187 intron1 Rory lcl|RO3G_02618 -1 17 17 intron3 Rory lcl|RO3G_02618 -1 44 44 intron3 Rory lcl|RO3G_02618 -1 89 89 intron3 Rory lcl|RO3G_02618 -1 114 114 intron1 Rory lcl|RO3G_02618 -1 174 174 intron1 Mcir gnl|Mucci2|41216 -1 9 9 intron3 Mcir gnl|Mucci2|41216 -1 33 33 intron3 Mcir gnl|Mucci2|41216 -1 78 78 intron3 Mcir gnl|Mucci2|41216 -1 105 105 intron1 Mcir gnl|Mucci2|41216 -1 159 159 intron1 Pbla gnl|Phybl1|19530 -1 16 16 intron3 Pbla gnl|Phybl1|19530 -1 40 40 intron3 Pbla gnl|Phybl1|19530 -1 94 94 intron3 Pbla gnl|Phybl1|19530 -1 120 120 intron3 Pbla gnl|Phybl1|19530 -1 179 179 intron1 Cint gi|198433849|ref|XP_002124509.1| -1 15 15 intron3 Cint gi|198433849|ref|XP_002124509.1| -1 69 69 intron3 Cint gi|198433849|ref|XP_002124509.1| -1 102 102 intron1 Cint gi|198433849|ref|XP_002124509.1| -1 164 164 intron3 Cint gi|198433849|ref|XP_002124509.1| -1 200 200 intron1 Bmal gi|170592242|ref|XP_001900878.1| -1 57 57 intron3 Bmal gi|170592242|ref|XP_001900878.1| -1 90 90 intron1 Bmal gi|170592242|ref|XP_001900878.1| -1 117 117 intron3 Bmal gi|170592242|ref|XP_001900878.1| -1 152 152 intron3 Bmal gi|170592242|ref|XP_001900878.1| -1 181 181 intron1 Cbri gi|268529044|ref|XP_002629648.1| -1 42 42 intron3 Cbri gi|268529044|ref|XP_002629648.1| -1 75 75 intron1 Cbri gi|268529044|ref|XP_002629648.1| -1 137 137 intron3 Cbri gi|268529044|ref|XP_002629648.1| -1 170 170 intron3 Cele gi|17538017|ref|NP_496215.1| -1 42 42 intron3 Cele gi|17538017|ref|NP_496215.1| -1 75 75 intron1 Cele gi|17538017|ref|NP_496215.1| -1 137 137 intron3 Cele gi|17538017|ref|NP_496215.1| -1 170 170 intron3 Mbre gi|167521860|ref|XP_001745268.1| -1 30 30 intron3 Mbre gi|167521860|ref|XP_001745268.1| -1 161 161 intron1 Prsp lcl|PTSG_05158T0 -1 91 91 intron3 Prsp lcl|PTSG_05158T0 -1 138 138 intron3 Prsp lcl|PTSG_05158T0 -1 166 166 intron1 Prsp lcl|PTSG_05158T0 -1 186 186 intron3 Prsp lcl|PTSG_05158T0 -1 222 222 intron1 Lgig gnl|Lotgi1|162533 -1 25 25 intron3 Lgig gnl|Lotgi1|162533 -1 58 58 intron1 Lgig gnl|Lotgi1|162533 -1 120 120 intron3 Lgig gnl|Lotgi1|162533 -1 156 156 intron1 Hmag gi|221132127|ref|XP_002163612.1| -1 15 15 intron2 Hmag gi|221132127|ref|XP_002163612.1| -1 63 63 intron2 Hmag gi|221132127|ref|XP_002163612.1| -1 98 98 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 9 9 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 35 35 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 59 59 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 106 106 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 154 154 intron3 Nvec gi|156362486|ref|XP_001625808.1| -1 190 190 intron1 Drer gi|66472380|ref|NP_001018520.1| -1 3 3 intron3 Drer gi|66472380|ref|NP_001018520.1| -1 37 37 intron3 Drer gi|66472380|ref|NP_001018520.1| -1 61 61 intron3 Drer gi|66472380|ref|NP_001018520.1| -1 94 94 intron1 Drer gi|66472380|ref|NP_001018520.1| -1 156 156 intron3 Drer gi|66472380|ref|NP_001018520.1| -1 192 192 intron1 Hsap gi|5174419|ref|NP_006003.1| -1 66 66 intron3 Hsap gi|5174419|ref|NP_006003.1| -1 90 90 intron3 Hsap gi|5174419|ref|NP_006003.1| -1 123 123 intron1 Hsap gi|5174419|ref|NP_006003.1| -1 185 185 intron3 Hsap gi|5174419|ref|NP_006003.1| -1 221 221 intron1 Amel gi|66515781|ref|XP_392540.2| -1 12 12 intron3 Amel gi|66515781|ref|XP_392540.2| -1 57 57 intron3 Amel gi|66515781|ref|XP_392540.2| -1 188 188 intron1 Tadh gi|196010065|ref|XP_002114897.1| -1 6 6 intron3 Tadh gi|196010065|ref|XP_002114897.1| -1 35 35 intron3 Tadh gi|196010065|ref|XP_002114897.1| -1 59 59 intron3 Tadh gi|196010065|ref|XP_002114897.1| -1 92 92 intron1 Tadh gi|196010065|ref|XP_002114897.1| -1 106 106 intron3 Tadh gi|196010065|ref|XP_002114897.1| -1 154 154 intron3 Tadh gi|196010065|ref|XP_002114897.1| -1 190 190 intron1 Bmor gnl|Bmor|BGIBMGA005089-PA -1 10 10 intron1 Bmor gnl|Bmor|BGIBMGA005089-PA -1 346 346 intron1 Dmel gi|20129427|ref|NP_609388.1| -1 14 14 intron3 Dmel gi|20129427|ref|NP_609388.1| -1 156 156 intron3 Dmoj gi|195118808|ref|XP_002003928.1| -1 125 125 intron3 Aaeg gi|157124223|ref|XP_001660372.1| -1 14 14 intron3 Agam gi|118791462|ref|XP_319765.3| -1 14 14 intron3 Nvit gi|156541196|ref|XP_001599209.1| -1 12 12 intron3 Nvit gi|156541196|ref|XP_001599209.1| -1 57 57 intron3 Nvit gi|156541196|ref|XP_001599209.1| -1 188 188 intron1 Bflo gi|260821306|ref|XP_002605974.1| -1 6 6 intron3 Bflo gi|260821306|ref|XP_002605974.1| -1 42 42 intron3 Bflo gi|260821306|ref|XP_002605974.1| -1 66 66 intron3 Bflo gi|260821306|ref|XP_002605974.1| -1 99 99 intron1 Bflo gi|260821306|ref|XP_002605974.1| -1 161 161 intron3 Bflo gi|260821306|ref|XP_002605974.1| -1 197 197 intron1 CspI gnl|Capca1|163852 -1 8 8 intron3 CspI gnl|Capca1|163852 -1 67 67 intron3 CspI gnl|Capca1|163852 -1 100 100 intron1 CspI gnl|Capca1|163852 -1 162 162 intron3 CspI gnl|Capca1|163852 -1 198 198 intron1 Hrob gnl|Helro1|84094 -1 115 115 intron1 Spur gi|115634688|ref|XP_786892.2| -1 6 6 intron3 Spur gi|115634688|ref|XP_786892.2| -1 41 41 intron3 Spur gi|115634688|ref|XP_786892.2| -1 65 65 intron3 Spur gi|115634688|ref|XP_786892.2| -1 98 98 intron1 Spur gi|115634688|ref|XP_786892.2| -1 160 160 intron3 Spur gi|115634688|ref|XP_786892.2| -1 196 196 intron1