, including all inherited members.
| _classname_() | PLearn::Template | [static] |
| _getOptionList_() | PLearn::Template | [static] |
| _getRemoteMethodMap_() | PLearn::Template | [static] |
| _isa_(const Object *o) | PLearn::Template | [static] |
| _new_instance_for_typemap_() | PLearn::Template | [static] |
| _static_initialize_() | PLearn::Template | [static] |
| _static_initializer_ | PLearn::Template | [static] |
| asString() const | PLearn::Object | [virtual] |
| asStringRemoteTransmit() const | PLearn::Object | [virtual] |
| build() | PLearn::Template | [virtual] |
| build_() | PLearn::Template | [private] |
| call(const string &methodname, int nargs, PStream &io) | PLearn::Object | [virtual] |
| changeOption(const string &optionname, const string &value) | PLearn::Object | |
| changeOptions(const map< string, string > &name_value) | PLearn::Object | [virtual] |
| chem | PLearn::Molecule | |
| classname() const | PLearn::Template | [virtual] |
| coordinates | PLearn::Molecule | |
| declareMethods(RemoteMethodMap &rmm) | PLearn::Object | [protected, static] |
| declareOptions(OptionList &ol) | PLearn::Template | [protected, static] |
| declaringFile() | PLearn::Template | [inline, static] |
| deepCopy(CopiesMap &copies) const | PLearn::Template | [virtual] |
| deepCopyNoMap() | PLearn::Object | |
| dev | PLearn::Template | |
| feature_names | PLearn::Molecule | |
| features | PLearn::Molecule | |
| geom | PLearn::Molecule | |
| getOption(const string &optionname) const | PLearn::Object | |
| getOptionList() const | PLearn::Template | [virtual] |
| getOptionMap() const | PLearn::Template | [virtual] |
| getOptionsToRemoteTransmit() const | PLearn::Object | [virtual] |
| getOptionsToSave() const | PLearn::Object | [virtual] |
| getRemoteMethodMap() const | PLearn::Template | [virtual] |
| getVrmlType(const std::string &name) | PLearn::Molecule | [static] |
| getVrmlVertexCoords(const std::string &name, PLearn::Mat &xmat) | PLearn::Molecule | [static] |
| hasOption(const string &optionname) const | PLearn::Object | |
| info() const | PLearn::Object | [virtual] |
| inherited typedef | PLearn::Template | [private] |
| load(const PPath &filename) | PLearn::Object | [virtual] |
| makeDeepCopyFromShallowCopy(CopiesMap &copies) | PLearn::Template | [virtual] |
| Molecule() | PLearn::Molecule | |
| Molecule(PLearn::Mat _chem, PLearn::Mat _geom, string vrml_file="") | PLearn::Molecule | |
| Molecule() | PLearn::Molecule | |
| Molecule(const PPath &filename) | PLearn::Molecule | |
| n_features() | PLearn::Molecule | [inline, virtual] |
| n_points() | PLearn::Molecule | [inline] |
| newread(PStream &in, unsigned int id=UINT_MAX) | PLearn::Object | |
| newwrite(PStream &out) const | PLearn::Object | [virtual] |
| Object(bool call_build_=false) | PLearn::Object | |
| oldread(istream &in) | PLearn::Object | [virtual] |
| parseOptionName(const string &optionname, Object *&final_object, OptionList::iterator &option_iter, string &option_index) | PLearn::Object | |
| parseOptionName(const string &optionname, const Object *&final_object, OptionList::iterator &option_iter, string &option_index) const | PLearn::Object | |
| PPointable() | PLearn::PPointable | [inline] |
| PPointable(const PPointable &other) | PLearn::PPointable | [inline] |
| prepareToSendResults(PStream &out, int nres) | PLearn::Object | [static] |
| read(istream &in) | PLearn::Object | [virtual] |
| readFromAMATFile(const PPath &filename) | PLearn::Molecule | [protected, virtual] |
| readFromFile(const PPath &filename) | PLearn::Molecule | [virtual] |
| readFromVRMLFile(const PPath &filename) | PLearn::Molecule | [protected, virtual] |
| readMolecule(const std::string &fileName) | PLearn::Molecule | [static] |
| readMolecules(const std::string &fileName, std::vector< PMolecule > &storage) | PLearn::Molecule | [static] |
| readOptionVal(PStream &in, const string &optionname, unsigned int id=UINT_MAX) | PLearn::Object | |
| readVrml(const std::string &name, PLearn::SurfMesh &sm) | PLearn::Molecule | [static] |
| ref() const | PLearn::PPointable | [inline] |
| run() | PLearn::Object | [virtual] |
| save(const PPath &filename) const | PLearn::Object | [virtual] |
| setOption(const string &optionname, const string &value) | PLearn::Object | |
| Template() | PLearn::Template | |
| unref() const | PLearn::PPointable | [inline] |
| usage() const | PLearn::PPointable | [inline] |
| vrml_face_set | PLearn::Molecule | |
| vrml_file | PLearn::Molecule | |
| vrml_line_set | PLearn::Molecule | |
| write(ostream &out) const | PLearn::Object | [virtual] |
| writeOptionVal(PStream &out, const string &optionname) const | PLearn::Object | |
| writeToAMATFile(const PPath &filename) | PLearn::Molecule | [protected, virtual] |
| writeToFile(const PPath &filename) | PLearn::Molecule | [virtual] |
| writeToVRMLFile(const PPath &filename) | PLearn::Molecule | [protected, virtual] |
| writeVrml(const std::string &name, const std::string &to, PLearn::SurfMesh &sm) | PLearn::Molecule | [static] |
| ~Object() | PLearn::Object | [virtual] |
| ~PPointable() | PLearn::PPointable | [inline, virtual] |